Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq640 215 6e-51
seq244 118 1e-21
>seq640
Length=99942
Score = 215 bits (238), Expect = 6e-51
Identities = 375/532 (70%), Gaps = 10/532 (2%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| || || || ||||||| || |||| |||||||| || | ||| |
Sbjct 46467 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 46408
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
| ||||||| ||||||| |||||||||||| || || || |||||||| || |||
Sbjct 46407 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 46348
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445
||| |||||| ||||||||| | || ||||| ||| | || || || ||| |
Sbjct 46347 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 46289
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | || | ||| || || || || |||||| || | || | || || ||
Sbjct 46288 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 46229
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
||| || |||| |||||||| || || ||||| |||||||||| ||||| | |||
Sbjct 46228 GCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 46169
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || ||||||||||| ||||||||||| || ||| | ||| |||| | || || |
Sbjct 46168 TG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTCATGCAGTTCATGGACCTTC 46110
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682
| ||| || || | ||||| | || ||| || || |||| ||| ||||| |||||
Sbjct 46109 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 46052
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741
||| || ||||| ||||| || || || ||| | | | | || ||||||||||| |
Sbjct 46051 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTGATGTGCCCCA 45993
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTA 53793
|||| ||||| || || || ||| |||||||| ||||| || ||| ||||
Sbjct 45992 ACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAGGAGCTGTA 45941
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct 45270 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 45211
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | |||||| |||
Sbjct 45210 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 45175
>seq244
Length=403494
Score = 118 bits (130), Expect = 1e-21
Identities = 185/265 (70%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || ||||| || ||||| |||||||||| || ||||| || | |
Sbjct 324234 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324175
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | |||||||| ||| |||| | |||| ||| | || ||| |
Sbjct 324174 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGG 324115
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || || | | | || | || | ||| | |||||||||| || || |||
Sbjct 324114 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 324055
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| |||||||| ||||| | || || | ||||||||||| | || ||||| ||||
Sbjct 324054 TCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCATGTTG 323995
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416
|||| ||||| ||||| |||||||
Sbjct 323994 TTGGAACCCACGAAGTTCTGAGCCA 323970
Score = 107 bits (118), Expect = 2e-18
Identities = 281/424 (66%), Gaps = 10/424 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
||||| |||||||| || |||||||||| ||| |||||||||| || || | || | |
Sbjct 324234 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 324175
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
||||| || | | ||| ||||| || | ||| ||| | | | || | |
Sbjct 324174 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 324116
Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
| || ||| | ||| ||| ||| || | |||| | ||||| || | ||||
Sbjct 324115 GTGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 324060
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
||||||| ||||||||| ||| || | |||||| | ||| |||||||||| ||| |
Sbjct 324059 CCGCATCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCA 324000
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||||| |||||||| |||||||||| | | || || |||||| | |
Sbjct 323999 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 323940
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||| | || || || | | | || | || |||| || | ||||||| | |
Sbjct 323939 CACCGTACGGGTATGCGGTGAGGCCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 323880
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
| || ||||||| || ||| | ||| || || || ||||| || ||||| |
Sbjct 323879 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 323820
Query 152291 CGTC 152294
||||
Sbjct 323819 CGTC 323816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 242/360 (67%), Gaps = 14/360 (4%)
Strand=Plus/Minus
Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816
||| || || | ||||| || || ||||||||||| || || || ||||| |||||
Sbjct 323350 CACTTGCAAGAAGTTGATGAGCAGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGT 323291
Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTT 152875
||||||||||||| | || || |||| | | |||| | |||| |||| |||||
Sbjct 323290 CATGATCATCAGATGGCCATAACGCAAG-CCTTTAGTATCTGTGTAGTCCTTCTTATGTT 323232
Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935
| || || | | ||| |||| ||| || || | || | | | ||| | | |
Sbjct 323231 GCAGACCCAAAAACTTCTTGATGTTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGG 323172
Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995
||||| || |||||| | ||| ||||| ||||| || || || ||| || ||
Sbjct 323171 AAGCATCGCGCACATTGAGAATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGT 323112
Query 152996 CTACAAC-GCTCAGACCGGCAATAGCAAG---GGCTTTCGCCGAGTCACCCTCGGTGATA 153051
||||| |||| | || |||| |||||| ||| || |||||||| || || |
Sbjct 323111 TGACAACAGCTC-GCCCTGCAAGAGCAAGCAAGGC---GGCAGAGTCACCTTCTGTCAAG 323056
Query 153052 ATAAGCGTACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
|| || || || | || ||||| | ||||||||| ||||||||| ||||||||
Sbjct 323055 ATGAGTGTGCA--CTTGTGACCGTCCTTCGTACCGGCCTTGTTGGCGTCTGTAAGCTTGG 322998
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132
|||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 322189 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 322131
Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||||||||| || | |||||| || ||||| | |||||| ||
Sbjct 322130 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 322076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547211499148400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |