Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_028805.1
Length=126341
Score E
Sequences producing significant alignments: (Bits) Value
seq655 141 8e-29
>seq655
Length=68225
Score = 141 bits (156), Expect = 8e-29
Identities = 278/407 (68%), Gaps = 7/407 (2%)
Strand=Plus/Plus
Query 110399 ATCAATGATTTGATCGACGTTCTTGTATGCTTGCGGGCATTCATCCAGAATAGAATCAAG 110458
||| || |||| |||||| || || || |||||||| ||||||| | ||| || |||||
Sbjct 49511 ATCCATAATTTCATCGACATTTTTATACGCTTGCGGCGATTCATCTATAATGGATTCAAG 49570
Query 110459 CACCCGATGATTCACAAGGATTTCATCGTCCTGCCCTACGCGCAACGTCTGTGCAAACTC 110518
|| || ||||| | || ||||| || ||| |||| || || | ||||| ||
Sbjct 49571 TGAACGCTGGTTCACCACAATCTCATCTTCAGTCCCCACGCCCAGCGCCGAGGCAAAATC 49630
Query 110519 ATCAACTGTCACCAGTTCTTTGGTCGCACGGCGGGAGCGCAATCGCCCTGCCCCGTGACA 110578
|| || || ||||| || || || || || || | || |||||||| |||||
Sbjct 49631 CTCCACGGTAACCAGGCGCTTTGTTGCTGTACGCGAACGAATGCGTCCTGCCCCATGACA 49690
Query 110579 TATGGAGTAAAAATTCTTAGCCCCTTCCTCTTTACCTACCATGATGAACGAACTTGTGCC 110638
|| || ||| |||| | ||| || || ||||||||||| | ||| || ||
Sbjct 49691 GATTGAATAATAATTATCCTTCCCCTCGGGTTGGCCTACCATGATATATGAAGCAGTCCC 49750
Query 110639 CATAGAGCCGGGAATTAACGCAGGGTGTCCAGTCCCCTTGTATACTTTTGGGT--TCAGG 110696
||| || || ||||| | || || || || || || ||| || || | || ||
Sbjct 49751 CATTGAACCAGGAATAAGTGCGGGATGACCTGTTGCCAGATATGGCTTCGGATTATCCGG 49810
Query 110697 AAATGACCCGGAGGAAGAGCACGTGTAGCTCCTTTACGATGTACAAGCATGG--GCTGGT 110754
|||||| | ||| | ||||||||||||||||| || ||||||| | | || |
Sbjct 49811 --ATGACCTGCAGGCAATGCACGTGTAGCTCCTTTGCGGTGTACAAAAACCGACCCTTGA 49868
Query 110755 TGCG-GTGGAACTCTTTCAATGCATAGTTGTGCATCAGGTCATAAAG 110800
| || ||| | || | | ||||||||||||||||||| ||||| ||
Sbjct 49869 TCCGCGTGCGATTCCTCCCATGCATAGTTGTGCATCAGATCATAGAG 49915
Score = 118 bits (130), Expect = 9e-22
Identities = 189/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 111395 CTTCTCGATAGCTTTGATCAGCTTACGCTTCAAGTCTTTATCTTTCAGATCATCCTTGTG 111454
|||||| |||||||| | || ||||| || | ||| ||||| || ||||| ||
Sbjct 50516 CTTCTCAATAGCTTTCACGAGTTTACGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATG 50575
Query 111455 AAGTGTAGTCTTCAGGACACGCATGCCACAACCAATGTCAGAACCCACGATAGAGGGTGA 111514
| | ||| | | || ||||||||||| || |||||| || ||||| || || ||
Sbjct 50576 CAAATTGGTCATATGCACCCGCATGCCACAGCCGATGTCACTGCCTACGATGGATGGAGA 50635
Query 111515 AACGAATCC-GTCTT-TCATGTTCCAGACGGCGGTTGTGCCTATGCACGTCCCCACCCCA 111572
|| ||||| |||| || | ||| || || |||||||| ||||| || || || ||
Sbjct 50636 TACAAATCCACTCTTGGCA--TCCCATACCGCAGTTGTGCCGATGCAGGTACCTACACCG 50693
Query 111573 ACGTGAGCATCTGGCGTATAAGACATGTGTATGTTACGCGGTATTGCAAGGTTGTTATTC 111632
|| || |||| ||||| ||| ||| | ||| ||| ||| ||| ||||| |||
Sbjct 50694 ACATGCACATCAGGCGTGTAACTCATATAGGAAATACCCGGGATTTGAAGATTGTTGTTC 50753
Query 111633 GCCATGTCGAAGACCTTATGCTCCAATG 111660
||||| ||||| ||||||| |||||||
Sbjct 50754 GCCATCTCGAACACCTTATAATCCAATG 50781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404163158838076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |