Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq191 196 4e-45 >seq191 Length=8852 Score = 196 bits (216), Expect = 4e-45 Identities = 476/721 (66%), Gaps = 0/721 (0%) Strand=Plus/Plus Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827 |||||| | |||||| || || ||||| || | ||| || || || ||||| | Sbjct 4019 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 4078 Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887 ||||| | | |||| | ||||| || ||||| ||||| || |||||||| || Sbjct 4079 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 4138 Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947 ||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || || Sbjct 4139 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 4198 Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007 | ||| || || || || || | ||||| || || |||||||| | |||||||| || Sbjct 4199 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 4258 Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067 || | | ||||||||||| | | || | ||||||| ||||| | || Sbjct 4259 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 4318 Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127 || | |||| | | ||||| | |||||| | ||||| | |||||| |||| Sbjct 4319 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 4378 Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187 || || ||||| || || || | || |||||||| |||||||||| | | | || || Sbjct 4379 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 4438 Query 49188 AACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTGGAATGTTTATC 49247 ||| | ||| || | | | | | ||||||| || || || ||||| || || || Sbjct 4439 AACGAGTGGTGCCAGTACCAGCGTTGTGGTATCGCCTACGCCTCCCGTGGAGTGCTTGTC 4498 Query 49248 TACTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTAATCATGGCATT 49307 |||||| | |||||| ||| || || ||||| || || || || || | ||| | | Sbjct 4499 TACTTTGATACCTTCAATTGCGGACAGATCAATCGTCTCGCCCGAGTTCACCATAGACAT 4558 Query 49308 AGTTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCCATTAACATAGA 49367 || || | | | ||| | | | ||| | ||||| | || ||||| | || Sbjct 4559 GGTCAAATCTGCGCGTTCCTTGTCCGTCATATCCTTGAAGAATATGGCCATCGCCCAAGC 4618 Query 49368 AGCCATTTGATAATCAGGAATGTCGCCGTTCGTGTAACCGCGGATGATAAAATCAATTTC 49427 | ||| ||||| || || || || | ||| || || | | | ||||||||| || Sbjct 4619 GCTGACTTGGTAATCCGGGATTTCCCCTTGCGTATATCCTTGAACAACAAAATCAATCTC 4678 Query 49428 TTCTTTTGAAAGCTCATAACCATCCCGTTTTTTCGCAATTAAATCGACCATTCTCATGAT 49487 | ||| || || | || || || || || ||||| | || |||||||||||||| Sbjct 4679 AGCAGTTGTCAGTTCTTTTCCGTCGCGCTTCTTAGCAATAATGTCTACCATTCTCATGAT 4738 Query 49488 G 49488 | Sbjct 4739 G 4739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452021882089440