Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq636 167 5e-36 seq476 129 1e-24 seq376 93.3 1e-13 >seq636 Length=763551 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | ||| ||||||||||| || |||||||| ||||||| ||| Sbjct 54447 TCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 54506 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 |||| || || || ||||||||||| |||||||| || || || ||||| || || | Sbjct 54507 TGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGAT 54566 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || |||||||| ||||||||| || ||||| ||||| ||||| || ||| || || Sbjct 54567 GCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTC 54626 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 54627 GAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54671 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| || ||||| |||||||| || || | || || | ||||| Sbjct 54688 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 54747 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||||||| || || ||||| || |||||||| || | || ||||||||| Sbjct 54748 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 54807 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | || |||||||| ||||| ||| Sbjct 54808 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 54867 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 54868 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 54899 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| || || |||||| ||| || || ||||| || || | ||||| Sbjct 54906 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGT 54965 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||||||||| || | |||||| |||||||| |||| || Sbjct 54966 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 55025 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| ||||| || ||||||||||| || ||||||||||| Sbjct 55026 TTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 55085 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 || || ||||| || |||| Sbjct 55086 GGTAATGGTCTTGCCGGTGA 55105 >seq476 Length=243870 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 210916 GAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGC 210975 || || || | || |||||||| || || | ||||| | ||||| |||| |||||| | Sbjct 53807 GAATGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 53866 Query 210976 CTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTT 211035 | |||||||| | || || ||||| || || | ||| ||||||||||||||||| | Sbjct 53867 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 53926 Query 211036 TCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGA 211092 | || || ||||||||||| ||| || |||||||| ||||| ||||| || |||| Sbjct 53927 TGACATTGTCGATGGTGTC---GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGA 53983 Query 211093 GAGTCTTTACAAA 211105 | |||||||| || Sbjct 53984 GGGTCTTTACGAA 53996 >seq376 Length=291155 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||| || || ||||| || || | ||||| | ||||| Sbjct 11893 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 11952 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| | ||| || ||||| || |||| ||| |||||||| Sbjct 11953 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 12011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159142227624170