Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_030920.1
Length=165868
Score E
Sequences producing significant alignments: (Bits) Value
seq233 172 6e-38
seq90 111 2e-19
>seq233
Length=416314
Score = 172 bits (190), Expect = 6e-38
Identities = 575/881 (65%), Gaps = 33/881 (4%)
Strand=Plus/Minus
Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836
|| || | ||| || || ||| | |||||| |||||| || ||||| || ||||| ||
Sbjct 224191 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 224132
Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895
||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || ||
Sbjct 224131 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 224073
Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955
| | |||| ||| ||||||||| ||||||| || |||||| |||| || ||
Sbjct 224072 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 224013
Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003
| ||||| |||| |||| || | ||||| ||| | ||| || ||
Sbjct 224012 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 223953
Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062
|| || |||||||| || || | | || ||| |||| || || || || | | || |
Sbjct 223952 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 223894
Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122
|| | ||||| || | || ||||| |||||||| ||||||||||||| || | ||
Sbjct 223893 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 223834
Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182
| || || || ||||| | | | ||| |||| ||||| || || | || |
Sbjct 223833 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 223774
Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242
|||||||| | ||| | || ||||| || ||| |||||| | || |||||||
Sbjct 223773 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 223714
Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302
| ||| |||| || || ||| | ||| || | || |||| ||||
Sbjct 223713 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 223654
Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362
| || || || || ||||| |||||| ||||| || || || | | ||||||
Sbjct 223653 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 223594
Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414
| |||||| | | || | || | || || || | || ||| | ||| | |
Sbjct 223593 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 223536
Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473
| || | ||||| || | || | | | || || | || ||||||||||||| |
Sbjct 223535 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 223480
Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533
|| | || | ||||| || || | || || |||||||| || |||||||| || |
Sbjct 223479 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 223420
Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592
| || || | || || | ||| | | |||||||||| || ||||||||| |
Sbjct 223419 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 223361
Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633
| ||||| ||| |||| | || | |||||||||||
Sbjct 223360 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 223320
>seq90
Length=20483
Score = 111 bits (122), Expect = 2e-19
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 132752 AATATGAGATTAGTGTGGAACGTAGTACATCGGTTTATCAATAGGGGTTATCTTCCCGAA 132811
|| || ||| | || ||| ||| ||||| || ||||| || ||||| ||| || |||
Sbjct 12384 AACATCAGACTCGTCTGGTCCGTCGTACAACGTTTTATGAACAGGGGATATGAGCCGGAA 12325
Query 132812 GACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAGAGTATTGATAAATTCGACCTTGAC 132871
|| || || || ||||||||||| || |||| || | ||||||||||| ||
Sbjct 12324 GATCTGTTTCAGATTGGTTGTATCGGGCTGCTCAAATCGGTGGATAAATTCGATCTCAGT 12265
Query 132872 TACGATGTTGCTTTTTCTACCTACGCTGTTCCTATGATTATTGGAGAGATTCAAAGGTTT 132931
|| ||||| || || ||||| ||||| || |||||||| ||||| ||||| | ||
Sbjct 12264 TATGATGTGAAATTCTCCACCTATGCTGTCCCGATGATTATCGGAGAAATTCAGCGTTTC 12205
Query 132932 ATTAGGGATGATGGAACCGTAAAGGTACCTCGAACAATTAAGGAGTTAGCAAATAA 132987
| |||||||||| || | ||||| ||| || | ||||| | || |||||
Sbjct 12204 CTGCGGGATGATGGTACACTCAAGGTCAGTCGTTCACTCAAGGAAATGGCGAATAA 12149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530645235407040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |