Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_030920.1 Length=165868 Score E Sequences producing significant alignments: (Bits) Value seq233 172 6e-38 seq90 111 2e-19 >seq233 Length=416314 Score = 172 bits (190), Expect = 6e-38 Identities = 575/881 (65%), Gaps = 33/881 (4%) Strand=Plus/Minus Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836 || || | ||| || || ||| | |||||| |||||| || ||||| || ||||| || Sbjct 224191 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 224132 Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895 ||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || || Sbjct 224131 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 224073 Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955 | | |||| ||| ||||||||| ||||||| || |||||| |||| || || Sbjct 224072 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 224013 Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003 | ||||| |||| |||| || | ||||| ||| | ||| || || Sbjct 224012 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 223953 Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062 || || |||||||| || || | | || ||| |||| || || || || | | || | Sbjct 223952 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 223894 Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122 || | ||||| || | || ||||| |||||||| ||||||||||||| || | || Sbjct 223893 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 223834 Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182 | || || || ||||| | | | ||| |||| ||||| || || | || | Sbjct 223833 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 223774 Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242 |||||||| | ||| | || ||||| || ||| |||||| | || ||||||| Sbjct 223773 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 223714 Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302 | ||| |||| || || ||| | ||| || | || |||| |||| Sbjct 223713 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 223654 Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362 | || || || || ||||| |||||| ||||| || || || | | |||||| Sbjct 223653 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 223594 Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414 | |||||| | | || | || | || || || | || ||| | ||| | | Sbjct 223593 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 223536 Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473 | || | ||||| || | || | | | || || | || ||||||||||||| | Sbjct 223535 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 223480 Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533 || | || | ||||| || || | || || |||||||| || |||||||| || | Sbjct 223479 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 223420 Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592 | || || | || || | ||| | | |||||||||| || ||||||||| | Sbjct 223419 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 223361 Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633 | ||||| ||| |||| | || | ||||||||||| Sbjct 223360 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 223320 >seq90 Length=20483 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 132752 AATATGAGATTAGTGTGGAACGTAGTACATCGGTTTATCAATAGGGGTTATCTTCCCGAA 132811 || || ||| | || ||| ||| ||||| || ||||| || ||||| ||| || ||| Sbjct 12384 AACATCAGACTCGTCTGGTCCGTCGTACAACGTTTTATGAACAGGGGATATGAGCCGGAA 12325 Query 132812 GACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAGAGTATTGATAAATTCGACCTTGAC 132871 || || || || ||||||||||| || |||| || | ||||||||||| || Sbjct 12324 GATCTGTTTCAGATTGGTTGTATCGGGCTGCTCAAATCGGTGGATAAATTCGATCTCAGT 12265 Query 132872 TACGATGTTGCTTTTTCTACCTACGCTGTTCCTATGATTATTGGAGAGATTCAAAGGTTT 132931 || ||||| || || ||||| ||||| || |||||||| ||||| ||||| | || Sbjct 12264 TATGATGTGAAATTCTCCACCTATGCTGTCCCGATGATTATCGGAGAAATTCAGCGTTTC 12205 Query 132932 ATTAGGGATGATGGAACCGTAAAGGTACCTCGAACAATTAAGGAGTTAGCAAATAA 132987 | |||||||||| || | ||||| ||| || | ||||| | || ||||| Sbjct 12204 CTGCGGGATGATGGTACACTCAAGGTCAGTCGTTCACTCAAGGAAATGGCGAATAA 12149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530645235407040