Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq144 154 2e-32 seq640 147 3e-30 >seq144 Length=510160 Score = 154 bits (170), Expect = 2e-32 Identities = 346/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || |||||||| |||| ||| || |||||||| || ||||| || || || || Sbjct 267107 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 267166 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||||||||| ||||| || || || ||||| |||||||| | || | || | Sbjct 267167 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 267226 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | | |||| ||||| || ||||| ||||||||| | | || || Sbjct 267227 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 267286 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAA-GtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || | || || ||||| || || | ||| | | ||| || | | ||| ||||| Sbjct 267287 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGC-TCGCTGATGTATGTATC 267345 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || | ||| ||| | |||||||| || || || || ||||| || ||||| || Sbjct 267346 GATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA 267405 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 |||| || || | |||||| ||||| | | || || || | | ||||| || || Sbjct 267406 GCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGAC 267465 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || ||||| || || || ||||| | || ||| || || || ||||| | Sbjct 267466 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 267525 Query 48599 AGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | ||| || |||||||| | || ||| || || | ||| | || ||||||||||| Sbjct 267526 GTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 267585 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| || ||||| ||||| | |||||| Sbjct 267586 GAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 267621 >seq640 Length=99942 Score = 147 bits (162), Expect = 3e-30 Identities = 528/815 (65%), Gaps = 18/815 (2%) Strand=Plus/Plus Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || ||||| || || | |||| | ||||| ||||| ||||| | || |||||||| Sbjct 45755 ATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTG 45814 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| | |||||| || ||||| || || || ||||| || |||| | |||| | Sbjct 45815 CGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGA 45874 Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTA-TCGCCTCTCTCTTTCAT 77907 |||| | ||| | ||| ||| | | | | | |||| ||||| |||| Sbjct 45875 ATAGCATACCATATTT-TCTGAGCACGAACCGTCTCACGGCCCTTGCCT-TCTCTCTCAT 45932 Query 77908 ATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCAT 77967 | | || ||| | || || || || ||||||| || ||||||||||| | Sbjct 45933 AACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGT 45992 Query 77968 TTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTA 78027 | |||||||||| | ||| || | | | || || | |||||||||||| || | Sbjct 45993 TGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAA 46052 Query 78028 TCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAA 78087 |||| ||||| || | ||| || | | | |||||| ||||| ||||| || Sbjct 46053 TCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAA 46112 Query 78088 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAG 78147 | || | |||| ||| | || | |||||| || || || || || || | | | || | Sbjct 46113 GGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTG 46172 Query 78148 GTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTG 78207 | || || || || ||||| || | || | || ||||| ||||| |||| | ||||| Sbjct 46173 GACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTG 46232 Query 78208 GAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 | | || |||||| ||||| || ||||| || ||| || || | || | || | Sbjct 46233 GTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGT 46292 Query 78268 TACTA--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | | ||| | | || || || || || |||| || || | || || || | Sbjct 46293 TGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 46350 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATG----TTAAGAAGAAAACAGCTAG 78381 |||||||||||||| || || ||||||||| ||||| |||||| | ||||| Sbjct 46351 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 46410 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 || || || || ||| | || | ||| || || ||||| || || | | Sbjct 46411 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 46466 Query 78442 TTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 | || | |||| |||||||| ||||| |||| ||| ||||| |||||| || Sbjct 46467 TCAACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCG 46525 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || |||||||| | ||| || || ||||| || Sbjct 46526 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTC 46560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663086349120