Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_031039.1 Length=251042 Score E Sequences producing significant alignments: (Bits) Value seq85 214 3e-50 seq97 167 4e-36 >seq85 Length=22521 Score = 214 bits (236), Expect = 3e-50 Identities = 405/589 (69%), Gaps = 8/589 (1%) Strand=Plus/Plus Query 144723 AATTCCAAATGGATATGTTGGTGTAGTTTATTCCCCTAATGGTGGAGTAAAAGAGACTAC 144782 |||||| ||||||||||| || || || ||||| || ||||| || |||||||| | ||| Sbjct 4648 AATTCCTAATGGATATGTCGGGGTTGTATATTCACCCAATGGAGGCGTAAAAGATAGTAC 4707 Query 144783 ACTTGATCAAGGTTGGCAT-TGGATCAAGCCTTTTGATAAAGTTACAGAATATCCAGTTC 144841 ||| |||||| ||| | | | | ||| ||| |||||||| || ||||||| ||| Sbjct 4708 ACTGAGTCAAGGGTGGAAACTCGTTGGAGCGTTT-GATAAAGTAACGAAATATCCGATTC 4766 Query 144842 GCATGCAAACAGTAAATAATAAAGACATCAAAGTAGCAACATCTGATGGTAAAAACATTG 144901 | || ||||| || | | || || || | | || || |||||||| || ||||| Sbjct 4767 GAATTCAAACGGTTGAATACAAGGATATTCAGATTGCGACTTCTGATGGGAAGAACATCA 4826 Query 144902 AAATGGATATTGCTTATAACTATGTTGTACAACCAGATAAAGTAGTAGATGTATTTAATA 144961 ||| ||| ||||||||||||| ||| ||||| ||||||| | |||| |||| Sbjct 4827 CAATTGATTTTGCTTATAACTACCAAGTAGAACCAAGTAAAGTATCTTCTATATTCAATA 4886 Query 144962 AGTTTGGTTCAGTTAAAGTTGAACAAATTGAGAATTCATATCTTAAATCACGTTTATGGG 145021 ||||| || ||| || || |||||||| || ||||||| ||| ||||||| | | Sbjct 4887 CATTTGGGCCAATTAGCATTCAAGAAATTGAGGATACATATCTCAAAACACGTTTCCGTG 4946 Query 145022 ATGCCTCTCGTAAAGTGATCTCTAAATATTCAGTAATTGATACTTATGGTCAAAAATCTT 145081 | | ||||||||| ||||| || | | |||| |||||| |||||| |||| || | Sbjct 4947 ACTCAGCTCGTAAAGGTATCTCCAAGTTTACAGTCATTGATGTATATGGTGAAAAGTCAT 5006 Query 145082 CAGAAGCGGCTAGTGAAATTCAAAAAAC-ATTTGCTGAAGATATGAAGAAATATGGTTTT 145140 | ||||| | |||| | || || ||| ||| |||| || | || | | || ||| Sbjct 5007 CCGAAGCAG-GAGTGGATGTCCAACAACGTTTTTCTGATGACGTTAAAGAGTTAGGCTTT 5065 Query 145141 ATTATTGATGATCTTACTTTAGGTGTGCCAAAGCCAGAT--AAAGCTACTCAAGATGCAA 145198 ||| | | |||| ||||||| || | || ||| ||| ||||| || |||| Sbjct 5066 ATTGTATCCAACGTTACCGTAGGTGTTCCTCAACCTGATGCTAAG--ACTCAGGAAGCAA 5123 Query 145199 TTGATGCTAGAGTTAAATCTTCTCAGGAATTAGAACGTTCTCAAACTGAAATCAAGATTG 145258 | ||| | ||| || | ||||| ||| | |||||| |||||| | |||| | Sbjct 5124 TCGATAAGCGTGTTGAAGCCTCTCAAGAACTGGAACGTAAAACGACTGAACTTGAGATCG 5183 Query 145259 CTAAAGCAGATGCTGAGAGGAAGAAAATTGAAGCTCAAGGTGTTGCAGA 145307 | || ||| || || | ||| | ||||| |||||| |||||| Sbjct 5184 CCAAGAAAGAAGCAGAACGTAAGCGCGTGGAAGCGCAAGGTAATGCAGA 5232 >seq97 Length=18159 Score = 167 bits (184), Expect = 4e-36 Identities = 1010/1590 (64%), Gaps = 60/1590 (4%) Strand=Plus/Minus Query 190894 ATCACTATTGACAAATAAAGTAGTAGAAATACCCTGATCAATATGTTGTTGGATTACTGC 190953 |||||| || ||| | | | || || || || || || | ||| | || || | || Sbjct 17137 ATCACTGTTTACATGAAGAATTGTGGAGATTCCTTGGTCCACATGCGGCTGAATCTCCGC 17078 Query 190954 AACCATGTCAATAATTTTATTTTGATCCATATCATATGCTGATTTGTAAGACCATTGAGT 191013 || || ||||| | || ||||||||| | ||| |||||||||||| | | | | Sbjct 17077 AATCAAATCAATTACCTTGAATTGATCCATCTGATACGCTGATTTGTAATAGAAGACA-T 17019 Query 191014 TCTACCGTC-TAGATATGGCATTGGATAGTATGTTGTAGAGTCATGATATGTTCTGTTTT 191072 | | | | || ||| ||||| ||||| || || || || | ||| |||| | | Sbjct 17018 TATCCTTTTGTAAATAGGGCATCGGATAATACGTGGTTGAATTGGCATAGGTTCGTGTCT 16959 Query 191073 CAATTCGACTTACAACTGGCATAATAGATTGA-GTTGAATTCTGTACATAACTAATTGAC 191131 ||||| | ||||| ||||| | | | || |||| ||| || | |||| || | Sbjct 16958 CAATTTGTTCTACAATGGGCATTACAC-TGGATGTTGCATTTTGGATATAAGAGAT-GCT 16901 Query 191132 TG-TGTAGGTGCAATAGCAAGTCTATAAGCATGGTATAAACCATTTTCTTTTACTTG--- 191187 || ||| || |||||||| | | ||| ||||| || | |||||||| | |||| Sbjct 16900 TGCTGTTGGAGCAATAGCCATGCGATAGGCATGATAGAGGCCATTTTCCATCACTTTAAA 16841 Query 191188 -TTCTGCTAATTCAGCCCAATCTTCTTTTGTTGGAACAAAGATTCCCTCAAATAATTCTT 191246 || ||| ||| ||||| || | |||||| ||||| | ||| |||| || Sbjct 16840 TTTAAGCTGTTTC----CAATCATCGGGCGAAGGAACATCAATTCCGTTAAACAATTGTT 16785 Query 191247 TTACTTTTTGACTTCTAGGTGTATAATCATTTTCGATATAACGTTTAAAATAATTACCAT 191306 |||||| | | || ||||| | | |||||| | |||||| |||| Sbjct 16784 GTACTTTCGATGTGTTGGGACGGTAATCCGTGGTCACATAACGATCAAAATATACACCAG 16725 Query 191307 TAGCATATTCAGAATCTTCAAAACGATGGAAttttttatttttCTCAATAGCAATTTCCA 191366 | ||||| || || || ||||| | |||||| || | | || |||| |||| Sbjct 16724 TCGCATAGTCGGACTCCTCAAATCCATGGAACCGTTGGCCGGTTTGCATTGCAAACTCCA 16665 Query 191367 TACTTCGTCTA-ATACTATGGAAATTCATAATTGCAAAGAA--TACATTGGCAAAATCTC 191423 ||||| ||| | ||| ||||||| | |||||| ||| | ||||||| Sbjct 16664 TACTTT-TCTCCAGGGAATGATAATTCATGGTCATAAAGAAGGTACGTA--CAAAATCCT 16608 Query 191424 TAGCTACAGCACTTTCATATGAAATACTATTTTTAGCAAGGAAACCATGTAAGTTCATTG 191483 | ||| | | || ||||| | ||| || || || |||| |||| || | ||||| | Sbjct 16607 TGGCTTCCGAGCTCTCATAAGCAATCCTGTTCTTGGCAAAATAACCGTGCAGATTCATGG 16548 Query 191484 CGCCTAAACCAACTGAATGGAATAGAGCATTTGCTTTTCTTATAGATGGTGCATTTTTGA 191543 | || |||||||| ||||| | | | || ||||| || | || ||||| | Sbjct 16547 CACCCAAACCAACGGAATGCATTTCGGAGTTGGCTTTGGCTACACCAGGAGCATTGGCAA 16488 Query 191544 TATCACTCTTATCTGTTACAGATGTTAAAATATCCATTGCAATATCTACAGAATCTTTAA 191603 || || | || | || ||||| | |||| | || || || || || | Sbjct 16487 CATGCGTCATGTCGCTGACGGATGTCAGTGCGATCATTCCCTCATGAACGGATTCCTTGA 16428 Query 191604 ATTTTTTAGTCTCCATTACATTAACGATATTTAATGATGCAAGGTTACAACTGATTCCCA 191663 || | ||||||| |||||||| ||||| | || || ||||| || || || | Sbjct 16427 TCTTGCCACTCTCCATAACATTAACAATATTGAGGGAGGCCAGGTTGCAGCTAATATCTT 16368 Query 191664 ATCC--TAATTCATCTTCTTCTCCATAATTATTAATTACTGA----TACTGAACTTAACT 191717 | |||| ||| || ||||| | ||||| | || | ||||| || Sbjct 16367 TGCGGATAAT--ATCCGGTTGACCATAGTCTGTAATTTCAGAAGTCTCCTGAAGTT---- 16314 Query 191718 GCATAATTTCAGTACAAAGGTTAGAGAATTTAATTTCACCAATTGCTTTTAAAGCATGTT 191777 | | || || || || ||||| || | ||| | || || | |||||| |||||| Sbjct 16313 GGAAGATCTCTGTGCAGAGGTTGGACATTTTGACTTGTCCTACGTTTTTTAAGGCATGTG 16254 Query 191778 CTTTATTAGCATTTGTTTTGAAGAACAGATAAGGGTATCCTGATTCTAATTGAGTCATTG 191837 ||| ||||||||| ||||| | | ||| || || || ||||| | |||| |||| | Sbjct 16253 CTTGATTAGCATTGGTTTTATTAATGATATAGGGATAGCCGGATTCAAGTTGAATCATCG 16194 Query 191838 CAATTTGATTCATTAGTTTCATTGGTGATAATTCAC-ATACAAATTTCTTAATATTTGGA 191896 | |||| ||| | | | || | || || || ||||| | | Sbjct 16193 CTATTTTGGTCAGCATATCCCGTGC----ACTTAACGATTTTTTCTTCTTCACACGGTCG 16138 Query 191897 TTATTAACTAATTCATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCATAT 191956 | | | || ||||||||| ||||| | |||||| ||||| ||| | ||||||| Sbjct 16137 TCAGCGAGCAACGTATCATACATCACATCCAGATCCATATCATCCAAATGTGTTCCATAC 16078 Query 191957 TCTTTTTCGACACTATAAGGAGAGAATGTATAGAACTCTTC-TTCTCCTGATTCTAGCAA 192015 | || | |||||||||||| | ||| ||| || || || || ||| | ||| Sbjct 16077 GCCTTATAGACACTATAAGGTGCGAAGAGATACAAGGGCTCATTATCTTGAGCC-AGC-- 16021 Query 192016 TTGAATAAATTTATCAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACGAATGCTATC 192075 | | ||| || |||||| |||| ||| | || || ||||||| ||| || | || Sbjct 16020 -TTATAAAAACGATTAGGAACGATAAGTCCGATAGAGAGAGTTTTCAGACGGATTTTCTC 15962 Query 192076 GTCAGCATTGAtttttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTAAG 192135 ||| |||||||| |||||| | | || | | |||| |||| | ||||||||| Sbjct 15961 GTCCGCATTGATCTTTTTACTGTCCAGCAGTTCCATAACGTCCCAACCGAAAATATTATA 15902 Query 192136 ATAAACAGCTCCTGAGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGTTC 192195 || | || || || || || ||||||||||||||||| || |||||||||| | || Sbjct 15901 GTATGCTGCGCCAGAACCCTTCCGTTGACCCATCTGATCGGCGTAAGAGAAACCATCCTC 15842 Query 192196 CAATAATTTCATTACAGGAATAACACCTTTAGCGGCATTTTCTTCACCATTTACTG-GAT 192254 || | || | ||||| ||| ||||| || || ||| |||| |||| || | Sbjct 15841 CATCAGCTTGAGAACAGGCGTAATGCCTTTCGCAGCCCCTTCGACACC-TTTAATGACTT 15783 Query 192255 CTC--CAAGCATTCTTAATTTAGAAACATTTGTTGA-AACCCCTCCACCA---ATTTTAG 192308 ||| | |||| | || || || | ||||| | || |||||||| ||||| | Sbjct 15782 CTCCGCGAGCA--CGCAACTTCGACA----GGTTGACAGCCACTCCACCACCGATTTTGG 15729 Query 192309 AGAGATACTTTGATTGTCCTTCA--ATATGACTAATTGAGTTTAGAGTATCATCAACTTC 192366 | | | | | | || |||| | || | || ||||| || | |||||| | ||| Sbjct 15728 ATAACTGCATACA-AGT-GTTCAGTACATAGTTTATGGAGTTCAGTGAATCATCCATTTC 15671 Query 192367 ATCTAAGAAACAAGATACAAGTTCCCCTCTTCTTGCTTTACCAGCATTAAGGAAAGTAGG 192426 | | ||| ||||| || ||||| || | | ||| |||||||| || ||||| || Sbjct 15670 AAGCAGGAAGCAAGAAACCAGTTCACCGCGCCGACTTTTTCCAGCATTCAGAAAAGTGGG 15611 Query 192427 AGTAGCAGGTTGAACTCTTTGTTCTATCAT 192456 || || ||||||| | || || ||||| Sbjct 15610 GGTCGCGGGTTGAAGACGCTGCTCCATCAT 15581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 803199793627360