Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_031039.1
Length=251042
Score E
Sequences producing significant alignments: (Bits) Value
seq85 214 3e-50
seq97 167 4e-36
>seq85
Length=22521
Score = 214 bits (236), Expect = 3e-50
Identities = 405/589 (69%), Gaps = 8/589 (1%)
Strand=Plus/Plus
Query 144723 AATTCCAAATGGATATGTTGGTGTAGTTTATTCCCCTAATGGTGGAGTAAAAGAGACTAC 144782
|||||| ||||||||||| || || || ||||| || ||||| || |||||||| | |||
Sbjct 4648 AATTCCTAATGGATATGTCGGGGTTGTATATTCACCCAATGGAGGCGTAAAAGATAGTAC 4707
Query 144783 ACTTGATCAAGGTTGGCAT-TGGATCAAGCCTTTTGATAAAGTTACAGAATATCCAGTTC 144841
||| |||||| ||| | | | | ||| ||| |||||||| || ||||||| |||
Sbjct 4708 ACTGAGTCAAGGGTGGAAACTCGTTGGAGCGTTT-GATAAAGTAACGAAATATCCGATTC 4766
Query 144842 GCATGCAAACAGTAAATAATAAAGACATCAAAGTAGCAACATCTGATGGTAAAAACATTG 144901
| || ||||| || | | || || || | | || || |||||||| || |||||
Sbjct 4767 GAATTCAAACGGTTGAATACAAGGATATTCAGATTGCGACTTCTGATGGGAAGAACATCA 4826
Query 144902 AAATGGATATTGCTTATAACTATGTTGTACAACCAGATAAAGTAGTAGATGTATTTAATA 144961
||| ||| ||||||||||||| ||| ||||| ||||||| | |||| ||||
Sbjct 4827 CAATTGATTTTGCTTATAACTACCAAGTAGAACCAAGTAAAGTATCTTCTATATTCAATA 4886
Query 144962 AGTTTGGTTCAGTTAAAGTTGAACAAATTGAGAATTCATATCTTAAATCACGTTTATGGG 145021
||||| || ||| || || |||||||| || ||||||| ||| ||||||| | |
Sbjct 4887 CATTTGGGCCAATTAGCATTCAAGAAATTGAGGATACATATCTCAAAACACGTTTCCGTG 4946
Query 145022 ATGCCTCTCGTAAAGTGATCTCTAAATATTCAGTAATTGATACTTATGGTCAAAAATCTT 145081
| | ||||||||| ||||| || | | |||| |||||| |||||| |||| || |
Sbjct 4947 ACTCAGCTCGTAAAGGTATCTCCAAGTTTACAGTCATTGATGTATATGGTGAAAAGTCAT 5006
Query 145082 CAGAAGCGGCTAGTGAAATTCAAAAAAC-ATTTGCTGAAGATATGAAGAAATATGGTTTT 145140
| ||||| | |||| | || || ||| ||| |||| || | || | | || |||
Sbjct 5007 CCGAAGCAG-GAGTGGATGTCCAACAACGTTTTTCTGATGACGTTAAAGAGTTAGGCTTT 5065
Query 145141 ATTATTGATGATCTTACTTTAGGTGTGCCAAAGCCAGAT--AAAGCTACTCAAGATGCAA 145198
||| | | |||| ||||||| || | || ||| ||| ||||| || ||||
Sbjct 5066 ATTGTATCCAACGTTACCGTAGGTGTTCCTCAACCTGATGCTAAG--ACTCAGGAAGCAA 5123
Query 145199 TTGATGCTAGAGTTAAATCTTCTCAGGAATTAGAACGTTCTCAAACTGAAATCAAGATTG 145258
| ||| | ||| || | ||||| ||| | |||||| |||||| | |||| |
Sbjct 5124 TCGATAAGCGTGTTGAAGCCTCTCAAGAACTGGAACGTAAAACGACTGAACTTGAGATCG 5183
Query 145259 CTAAAGCAGATGCTGAGAGGAAGAAAATTGAAGCTCAAGGTGTTGCAGA 145307
| || ||| || || | ||| | ||||| |||||| ||||||
Sbjct 5184 CCAAGAAAGAAGCAGAACGTAAGCGCGTGGAAGCGCAAGGTAATGCAGA 5232
>seq97
Length=18159
Score = 167 bits (184), Expect = 4e-36
Identities = 1010/1590 (64%), Gaps = 60/1590 (4%)
Strand=Plus/Minus
Query 190894 ATCACTATTGACAAATAAAGTAGTAGAAATACCCTGATCAATATGTTGTTGGATTACTGC 190953
|||||| || ||| | | | || || || || || || | ||| | || || | ||
Sbjct 17137 ATCACTGTTTACATGAAGAATTGTGGAGATTCCTTGGTCCACATGCGGCTGAATCTCCGC 17078
Query 190954 AACCATGTCAATAATTTTATTTTGATCCATATCATATGCTGATTTGTAAGACCATTGAGT 191013
|| || ||||| | || ||||||||| | ||| |||||||||||| | | | |
Sbjct 17077 AATCAAATCAATTACCTTGAATTGATCCATCTGATACGCTGATTTGTAATAGAAGACA-T 17019
Query 191014 TCTACCGTC-TAGATATGGCATTGGATAGTATGTTGTAGAGTCATGATATGTTCTGTTTT 191072
| | | | || ||| ||||| ||||| || || || || | ||| |||| | |
Sbjct 17018 TATCCTTTTGTAAATAGGGCATCGGATAATACGTGGTTGAATTGGCATAGGTTCGTGTCT 16959
Query 191073 CAATTCGACTTACAACTGGCATAATAGATTGA-GTTGAATTCTGTACATAACTAATTGAC 191131
||||| | ||||| ||||| | | | || |||| ||| || | |||| || |
Sbjct 16958 CAATTTGTTCTACAATGGGCATTACAC-TGGATGTTGCATTTTGGATATAAGAGAT-GCT 16901
Query 191132 TG-TGTAGGTGCAATAGCAAGTCTATAAGCATGGTATAAACCATTTTCTTTTACTTG--- 191187
|| ||| || |||||||| | | ||| ||||| || | |||||||| | ||||
Sbjct 16900 TGCTGTTGGAGCAATAGCCATGCGATAGGCATGATAGAGGCCATTTTCCATCACTTTAAA 16841
Query 191188 -TTCTGCTAATTCAGCCCAATCTTCTTTTGTTGGAACAAAGATTCCCTCAAATAATTCTT 191246
|| ||| ||| ||||| || | |||||| ||||| | ||| |||| ||
Sbjct 16840 TTTAAGCTGTTTC----CAATCATCGGGCGAAGGAACATCAATTCCGTTAAACAATTGTT 16785
Query 191247 TTACTTTTTGACTTCTAGGTGTATAATCATTTTCGATATAACGTTTAAAATAATTACCAT 191306
|||||| | | || ||||| | | |||||| | |||||| ||||
Sbjct 16784 GTACTTTCGATGTGTTGGGACGGTAATCCGTGGTCACATAACGATCAAAATATACACCAG 16725
Query 191307 TAGCATATTCAGAATCTTCAAAACGATGGAAttttttatttttCTCAATAGCAATTTCCA 191366
| ||||| || || || ||||| | |||||| || | | || |||| ||||
Sbjct 16724 TCGCATAGTCGGACTCCTCAAATCCATGGAACCGTTGGCCGGTTTGCATTGCAAACTCCA 16665
Query 191367 TACTTCGTCTA-ATACTATGGAAATTCATAATTGCAAAGAA--TACATTGGCAAAATCTC 191423
||||| ||| | ||| ||||||| | |||||| ||| | |||||||
Sbjct 16664 TACTTT-TCTCCAGGGAATGATAATTCATGGTCATAAAGAAGGTACGTA--CAAAATCCT 16608
Query 191424 TAGCTACAGCACTTTCATATGAAATACTATTTTTAGCAAGGAAACCATGTAAGTTCATTG 191483
| ||| | | || ||||| | ||| || || || |||| |||| || | ||||| |
Sbjct 16607 TGGCTTCCGAGCTCTCATAAGCAATCCTGTTCTTGGCAAAATAACCGTGCAGATTCATGG 16548
Query 191484 CGCCTAAACCAACTGAATGGAATAGAGCATTTGCTTTTCTTATAGATGGTGCATTTTTGA 191543
| || |||||||| ||||| | | | || ||||| || | || ||||| |
Sbjct 16547 CACCCAAACCAACGGAATGCATTTCGGAGTTGGCTTTGGCTACACCAGGAGCATTGGCAA 16488
Query 191544 TATCACTCTTATCTGTTACAGATGTTAAAATATCCATTGCAATATCTACAGAATCTTTAA 191603
|| || | || | || ||||| | |||| | || || || || || |
Sbjct 16487 CATGCGTCATGTCGCTGACGGATGTCAGTGCGATCATTCCCTCATGAACGGATTCCTTGA 16428
Query 191604 ATTTTTTAGTCTCCATTACATTAACGATATTTAATGATGCAAGGTTACAACTGATTCCCA 191663
|| | ||||||| |||||||| ||||| | || || ||||| || || || |
Sbjct 16427 TCTTGCCACTCTCCATAACATTAACAATATTGAGGGAGGCCAGGTTGCAGCTAATATCTT 16368
Query 191664 ATCC--TAATTCATCTTCTTCTCCATAATTATTAATTACTGA----TACTGAACTTAACT 191717
| |||| ||| || ||||| | ||||| | || | ||||| ||
Sbjct 16367 TGCGGATAAT--ATCCGGTTGACCATAGTCTGTAATTTCAGAAGTCTCCTGAAGTT---- 16314
Query 191718 GCATAATTTCAGTACAAAGGTTAGAGAATTTAATTTCACCAATTGCTTTTAAAGCATGTT 191777
| | || || || || ||||| || | ||| | || || | |||||| ||||||
Sbjct 16313 GGAAGATCTCTGTGCAGAGGTTGGACATTTTGACTTGTCCTACGTTTTTTAAGGCATGTG 16254
Query 191778 CTTTATTAGCATTTGTTTTGAAGAACAGATAAGGGTATCCTGATTCTAATTGAGTCATTG 191837
||| ||||||||| ||||| | | ||| || || || ||||| | |||| |||| |
Sbjct 16253 CTTGATTAGCATTGGTTTTATTAATGATATAGGGATAGCCGGATTCAAGTTGAATCATCG 16194
Query 191838 CAATTTGATTCATTAGTTTCATTGGTGATAATTCAC-ATACAAATTTCTTAATATTTGGA 191896
| |||| ||| | | | || | || || || ||||| | |
Sbjct 16193 CTATTTTGGTCAGCATATCCCGTGC----ACTTAACGATTTTTTCTTCTTCACACGGTCG 16138
Query 191897 TTATTAACTAATTCATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCATAT 191956
| | | || ||||||||| ||||| | |||||| ||||| ||| | |||||||
Sbjct 16137 TCAGCGAGCAACGTATCATACATCACATCCAGATCCATATCATCCAAATGTGTTCCATAC 16078
Query 191957 TCTTTTTCGACACTATAAGGAGAGAATGTATAGAACTCTTC-TTCTCCTGATTCTAGCAA 192015
| || | |||||||||||| | ||| ||| || || || || ||| | |||
Sbjct 16077 GCCTTATAGACACTATAAGGTGCGAAGAGATACAAGGGCTCATTATCTTGAGCC-AGC-- 16021
Query 192016 TTGAATAAATTTATCAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACGAATGCTATC 192075
| | ||| || |||||| |||| ||| | || || ||||||| ||| || | ||
Sbjct 16020 -TTATAAAAACGATTAGGAACGATAAGTCCGATAGAGAGAGTTTTCAGACGGATTTTCTC 15962
Query 192076 GTCAGCATTGAtttttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTAAG 192135
||| |||||||| |||||| | | || | | |||| |||| | |||||||||
Sbjct 15961 GTCCGCATTGATCTTTTTACTGTCCAGCAGTTCCATAACGTCCCAACCGAAAATATTATA 15902
Query 192136 ATAAACAGCTCCTGAGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGTTC 192195
|| | || || || || || ||||||||||||||||| || |||||||||| | ||
Sbjct 15901 GTATGCTGCGCCAGAACCCTTCCGTTGACCCATCTGATCGGCGTAAGAGAAACCATCCTC 15842
Query 192196 CAATAATTTCATTACAGGAATAACACCTTTAGCGGCATTTTCTTCACCATTTACTG-GAT 192254
|| | || | ||||| ||| ||||| || || ||| |||| |||| || |
Sbjct 15841 CATCAGCTTGAGAACAGGCGTAATGCCTTTCGCAGCCCCTTCGACACC-TTTAATGACTT 15783
Query 192255 CTC--CAAGCATTCTTAATTTAGAAACATTTGTTGA-AACCCCTCCACCA---ATTTTAG 192308
||| | |||| | || || || | ||||| | || |||||||| ||||| |
Sbjct 15782 CTCCGCGAGCA--CGCAACTTCGACA----GGTTGACAGCCACTCCACCACCGATTTTGG 15729
Query 192309 AGAGATACTTTGATTGTCCTTCA--ATATGACTAATTGAGTTTAGAGTATCATCAACTTC 192366
| | | | | | || |||| | || | || ||||| || | |||||| | |||
Sbjct 15728 ATAACTGCATACA-AGT-GTTCAGTACATAGTTTATGGAGTTCAGTGAATCATCCATTTC 15671
Query 192367 ATCTAAGAAACAAGATACAAGTTCCCCTCTTCTTGCTTTACCAGCATTAAGGAAAGTAGG 192426
| | ||| ||||| || ||||| || | | ||| |||||||| || ||||| ||
Sbjct 15670 AAGCAGGAAGCAAGAAACCAGTTCACCGCGCCGACTTTTTCCAGCATTCAGAAAAGTGGG 15611
Query 192427 AGTAGCAGGTTGAACTCTTTGTTCTATCAT 192456
|| || ||||||| | || || |||||
Sbjct 15610 GGTCGCGGGTTGAAGACGCTGCTCCATCAT 15581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 803199793627360
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