Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq185 104 4e-17 >seq185 Length=9056 Score = 104 bits (114), Expect = 4e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| ||||| ||||| ||| ||| |||| || ||| | || | |||||| | Sbjct 6049 GACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCC 5990 Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190 ||||||||||||| || || ||||| | || ||| ||| |||| || || || Sbjct 5989 GAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTG 5930 Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250 || ||||| ||| ||| || || || || |||||||| || || ||| | ||| Sbjct 5929 TTATGGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATC 5870 Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGG 196297 |||||||| ||||| || ||| |||| ||| | || || || ||||| Sbjct 5869 TGGGATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGG 5823 Score = 89.7 bits (98), Expect = 8e-13 Identities = 162/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 196785 TTCCTCGGTGTCCCGTTCAACATCGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAG 196844 ||||| || | || || ||||| || || || ||||| || ||| | || ||| Sbjct 5596 TTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCAG 5537 Query 196845 CAGGTCAATATGGTGGCGGGTGATTTCGTCTGGACGGGCGGCGAT--ACCCATCTGTACT 196902 ||| || | | | ||| || ||| ||||| | || || ||| || ||||| ||| Sbjct 5536 CAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCT--ACT 5479 Query 196903 CTAACCATCTGGAACAGGCCACGTTGCAGCTCTCCCGTGTACCGCATGATCTGCCTAAGC 196962 | |||||| ||||||| | | ||| | |||| ||| | | ||||||| | Sbjct 5478 CAAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAAC 5419 Query 196963 TCGTTATCAAACGTAAACCGGATTCCATTTTCGACTATAAGTTCGAAGATTTTGA 197017 | || ||||| ||||| |||||||||||||| || |||| ||| ||||||||||| Sbjct 5418 TGGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGA 5364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770300864223280