Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq185 138 4e-28
>seq185
Length=9056
Score = 138 bits (152), Expect = 4e-28
Identities = 413/626 (66%), Gaps = 26/626 (4%)
Strand=Plus/Minus
Query 51724 TGCATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCG 51783
|| |||| || || | ||||| || || || || || || | ||| ||||| |||
Sbjct 6072 TGGATAACGGCGTGCATAAGGGAGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCA 6013
Query 51784 CTCAACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATT 51843
|| || | |||||||| | || |||||||| | || |||||| | |||
Sbjct 6012 GACAGCTCCGATATGACCTATCCGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATC 5953
Query 51844 TCCCATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTT---CGGGCTCTACGAACGTCAACG 51900
| |||||| | |||||| | ||||| ||| |||| |||||| | |
Sbjct 5952 TGAAATCAGTCATTCATGAGTTGTTATGGTT--TTTGAGCGGGGA-TACGAATATATCCT 5896
Query 51901 ATCTCCATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGG 51960
|||| | | | ||||| | || ||||| || ||||| || ||||||||| | |||
Sbjct 5895 ATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTTGG 5836
Query 51961 GTCCTGTGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGG---TGGCGGCAAGGTCATCG 52017
|||| || || || || ||||| | |||||| || ||| | ||| || |
Sbjct 5835 GTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAG---ATTG 5779
Query 52018 ATCAGATCCATGAAGTCGTCA---AATCAATTAAGAACGATCCTGATAGTCGACGGCACA 52074
||||||| || || || | | |||||||| ||| |||| ||| ||||| |||
Sbjct 5778 ATCAGAT---TGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACC 5722
Query 52075 TTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACAC 52134
| || || |||||||||| || | | | ||| || | || ||||||
Sbjct 5721 TCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCG 5662
Query 52135 TATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTG-TATCA--GCGGTCTG 52191
|| || || || || ||||| ||||| || || || | || | || ||| || |
Sbjct 5661 CGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCATG---TATGCTCACAATGCGTTCCG 5605
Query 52192 CCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGA 52251
|| | |||| |||| | || |||||||||||||||||| | ||| |||| ||| |||
Sbjct 5604 TGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGA 5545
Query 52252 TTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCAT 52310
|||| | |||||| || ||||| || || || ||||| ||| | ||||| || || ||
Sbjct 5544 TTGC-CCAGCAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACAC 5486
Query 52311 ATCTACAACAACCATGTAGATCAGGT 52336
|||||| |||||||| || || ||
Sbjct 5485 ATCTACTCAAACCATGTGGAACAAGT 5460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190094514637380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |