Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq629 104 3e-17 seq8 89.7 6e-13 >seq629 Length=126711 Score = 104 bits (114), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476 ||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||| Sbjct 60097 TTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTC 60038 Query 157477 GAATCCAGCCTGAGACG 157493 |||||| |||| |||| Sbjct 60037 GAATCCCTCCTGGGACG 60021 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157419 TGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGA 157478 |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct 52367 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 52426 Query 157479 ATCCAGCCTGAGACGCCA 157496 |||| |||| |||| || Sbjct 52427 ATCCCTCCTGGGACGTCA 52444 >seq8 Length=58653 Score = 89.7 bits (98), Expect = 6e-13 Identities = 167/241 (69%), Gaps = 17/241 (7%) Strand=Plus/Plus Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476 |||| ||| |||||||| ||| ||||||| ||| ||| ||| ||| |||| ||||| Sbjct 27363 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 27421 Query 157477 GAATCCAGCCTGAGACGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCTGGGTT 157530 || || | ||| | ||| || || |||||||||||| |||||| || | | Sbjct 27422 GAGCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACT 27481 Query 157531 TAGGTTCCAGTGTCCTTGCGACGTGGAGGTTCAAGTCCTCTTACCGACAT------TGCC 157584 |||| || || ||| || ||||||| ||||||||||| || ||| | Sbjct 27482 TAGGATCTAGCGTCTTT--GACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAG 27539 Query 157585 CGAA--TAGCGCAGCGGTAGCGCACCTCCTTTACACGGAGATGGTCGGGGGTTCGAATCC 157642 || | | || ||||||||| ||| | |||| || || || ||||| |||||||| ||| Sbjct 27540 CGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCC 27599 Query 157643 C 157643 | Sbjct 27600 C 27600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596302295373280