Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq629 104 3e-17
seq8 89.7 6e-13
>seq629
Length=126711
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476
||||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||
Sbjct 60097 TTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTC 60038
Query 157477 GAATCCAGCCTGAGACG 157493
|||||| |||| ||||
Sbjct 60037 GAATCCCTCCTGGGACG 60021
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 157419 TGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGA 157478
|||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct 52367 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 52426
Query 157479 ATCCAGCCTGAGACGCCA 157496
|||| |||| |||| ||
Sbjct 52427 ATCCCTCCTGGGACGTCA 52444
>seq8
Length=58653
Score = 89.7 bits (98), Expect = 6e-13
Identities = 167/241 (69%), Gaps = 17/241 (7%)
Strand=Plus/Plus
Query 157417 TTTGTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTC 157476
|||| ||| |||||||| ||| ||||||| ||| ||| ||| ||| |||| |||||
Sbjct 27363 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 27421
Query 157477 GAATCCAGCCTGAGACGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCTGGGTT 157530
|| || | ||| | ||| || || |||||||||||| |||||| || | |
Sbjct 27422 GAGCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACT 27481
Query 157531 TAGGTTCCAGTGTCCTTGCGACGTGGAGGTTCAAGTCCTCTTACCGACAT------TGCC 157584
|||| || || ||| || ||||||| ||||||||||| || ||| |
Sbjct 27482 TAGGATCTAGCGTCTTT--GACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAG 27539
Query 157585 CGAA--TAGCGCAGCGGTAGCGCACCTCCTTTACACGGAGATGGTCGGGGGTTCGAATCC 157642
|| | | || ||||||||| ||| | |||| || || || ||||| |||||||| |||
Sbjct 27540 CGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCC 27599
Query 157643 C 157643
|
Sbjct 27600 C 27600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596302295373280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |