Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07- 28] 146 sequences; 30,106,281 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq114 170 2e-37 >seq114 Length=1292865 Score = 170 bits (188), Expect = 2e-37 Identities = 634/981 (65%), Gaps = 32/981 (3%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 1036272 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 1036213 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| | |||| | ||||||||| || | ||| | ||||| ||||| ||| Sbjct 1036212 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 1036153 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 1036152 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 1036093 Query 53885 CAGAC-----GA-CACGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 53935 || | || ||||| || | | | | | ||| |||||| || || Sbjct 1036092 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 1036042 Query 53936 AGTGTATACAA-TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 53994 | |||| || || || |||||| || |||||| || ||||| ||||| | Sbjct 1036041 CGCTCGTACAGCTCCTTGAA-CTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTT 1035983 Query 53995 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 54054 || ||||||| | ||| |||| | | || || | |||||||||||| ||||| Sbjct 1035982 GGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 1035923 Query 54055 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 ||| ||||| || | ||| | | | | ||| || ||||| ||||| ||| Sbjct 1035922 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 1035863 Query 54115 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGG 54174 || | |||| ||| | || | ||||||||| || | ||| |||| | | | || || Sbjct 1035862 GTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 1035803 Query 54175 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 || ||||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| Sbjct 1035802 ACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGG 1035743 Query 54235 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 | || ||| ||||||| || || || ||| || || || |||| | || || Sbjct 1035742 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 1035683 Query 54295 ACTAA-TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 1035682 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 1035624 Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 1035623 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 1035567 Query 54414 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 54469 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 1035566 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 1035508 Query 54470 TCAGA-AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 54528 || | |||| ||||| ||||| || |||| || || || |||||| || || Sbjct 1035507 AACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGAC 1035449 Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588 || |||||||| | ||| || || ||||| || | | |||| || ||| | || | Sbjct 1035448 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAG 1035389 Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 1035388 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGAC 1035329 Query 54649 AATAACTGAGTTGAGTTTATC 54669 ||| | ||||| || | ||| Sbjct 1035328 AATGGCCGAGTTCAGCTCATC 1035308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720516458080