Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07- 28] 146 sequences; 30,106,281 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq59 307 1e-78 seq81 152 5e-32 seq124 93.3 4e-14 >seq59 Length=4019949 Score = 307 bits (340), Expect = 1e-78 Identities = 557/796 (70%), Gaps = 23/796 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||||||||| || |||||||| | |||||| | || ||| Sbjct 266636 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 266577 Query 116696 TCCAAGGA-CACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | ||| | |||||| |||| || |||||| Sbjct 266576 TCGAAGGATCTCCA-CGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTC 266518 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct 266517 ACACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 266458 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| |||| | |||||||| | | ||||| || |||||||||||||| |||||| | Sbjct 266457 CTTCAGCTCTG-AGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 266399 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTC 116928 |||||||| | ||||| || | ||||| |||||||| || ||| | ||| | Sbjct 266398 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 266339 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||| | | |||| || |||||||| | || || ||| || |||||| Sbjct 266338 AGCAGCGAACATAC--CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGC 266281 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGG 117047 || |||||| |||| ||||| | | || ||| || | |||| | || || | | Sbjct 266280 TGACTGGGCGTTGCGATGGATTTCTGACA-AGAACTCGACATTCGCCCTCCGTCTCATTG 266222 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || ||||| ||||| ||||||| || || ||| || || || || ||||| | Sbjct 266221 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 266162 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||||||| || |||||| |||| || || ||| ||||||||||||||| | || |||| Sbjct 266161 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 266102 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 | |||| ||||| ||||| | |||||| |||| || | | |||| | || Sbjct 266101 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAGG 266042 Query 117228 CGCGCGT-CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | || ||| | ||| ||||||| || ||| | ||||||||| ||| | || || Sbjct 266041 CCCTTGTGCAGAG-CATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 265983 Query 117287 GCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTT 117345 || || || ||| || ||||| | || | ||||| |||||||| || || Sbjct 265982 GCTCTTCC-ATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATT 265924 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCA---CTACAACACGCCCAA 117402 ||||||||| | || ||| | ||| ||||| |||| | ||||||| | |||| Sbjct 265923 CGTCGCCGATCGCCTACTGTT--AGC-ACTCGGCAACAAGAAGTTCTACAACGCCACCAA 265867 Query 117403 CCCGCTGGACTTTATG 117418 ||| | ||||| ||| Sbjct 265866 CCCCTTCGACTTCATG 265851 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 |||||||| || ||||| ||||| |||||||| |||| ||||| | | ||||| | | Sbjct 1505715 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 1505656 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| ||||| |||||||||| || | Sbjct 1505655 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTTTG 1505596 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||| |||| || | ||||||||| ||||||||||||||||||| Sbjct 1505595 ATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAG 1505536 Query 40879 G 40879 | Sbjct 1505535 G 1505535 >seq81 Length=1972082 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| |||||||| |||| || ||| | || Sbjct 1264874 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 1264815 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| ||| || | ||||| ||||||||||| ||||||| Sbjct 1264814 GACACGATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCA 1264756 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| || || || || ||||| Sbjct 1264755 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 1264696 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| |||| ||||| | ||| |||| Sbjct 1264695 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCG 1264660 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| ||||| ||| | Sbjct 1265102 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 1265043 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| ||||| | |||||| Sbjct 1265042 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 1264983 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||| ||||| || || | || || || |||||||||| Sbjct 1264982 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 1264923 Query 40870 ATCCAGAAGGA 40880 |||||||| || Sbjct 1264922 ATCCAGAAAGA 1264912 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||| ||| |||| || || | |||||| | | | | | ||| Sbjct 1265308 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGA 1265249 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | || || || ||||| || | ||||||||||| | || | ||| |||| Sbjct 1265248 GCAAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCA 1265189 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| |||||||| |||||||||||| ||||||||| ||| || | Sbjct 1265188 AGCAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCC 1265129 Query 40892 ATCTAGT 40898 |||| || Sbjct 1265128 ATCTCGT 1265122 >seq124 Length=1192383 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || || |||||||||| || | |||| ||| ||||| ||||| || Sbjct 989505 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 989446 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | ||||||||| |||||||||||| ||||||||| ||| || || || || Sbjct 989445 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGT 989390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218259724960