Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07-
28] 146 sequences; 30,106,281 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq81 93.3 4e-14
>seq81
Length=1972082
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||| || || | ||| || ||| || ||| ||||||
Sbjct 1264893 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 1264952
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || |||| || | | ||||| || || || ||||| || ||||| |
Sbjct 1264953 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 1265012
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975
|| || | |||||| | ||| ||||| || ||| ||||| || | ||||||||
Sbjct 1265013 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 1265070
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || |||||||||||
Sbjct 1265071 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1265102
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
|||| ||||||||||| ||| || ||||| || | ||| |||| | | ||||| |
Sbjct 1264660 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAAT--CCGAAAGTGTCCGGC 1264717
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||| ||||| || ||| | ||||| | | ||||| || || || || || || |
Sbjct 1264718 CGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCT 1264777
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || |||| ||||||| | ||| ||||| | || || || | ||||
Sbjct 1264778 TGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 1264837
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || || || || |||||
Sbjct 1264838 TGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1264874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290381868560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |