Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07-
28] 146 sequences; 30,106,281 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq114 178 2e-39
>seq114
Length=1292865
Score = 178 bits (196), Expect = 2e-39
Identities = 634/978 (65%), Gaps = 26/978 (3%)
Strand=Plus/Minus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 1036272 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 1036213
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| | |||| | |||||| || || | ||| | ||||| ||||| |||
Sbjct 1036212 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 1036153
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 1036152 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 1036093
Query 63072 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGT 63125
|| | || | ||| || | | | | | | | |||||| || || |
Sbjct 1036092 CATATTTTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGC 1036039
Query 63126 GTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184
|||| || || ||||||||| || |||||| || ||||| ||||| | ||
Sbjct 1036038 TCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGG 1035980
Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244
||||||| | ||| |||| | | || || | |||||||||||| ||||||||
Sbjct 1035979 GCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 1035920
Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304
||||| || | ||| | | | | ||| || ||||| ||||| ||| ||
Sbjct 1035919 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 1035860
Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364
| |||| ||| | || | ||||||||| || | ||| ||||| | | | || || ||
Sbjct 1035859 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 1035800
Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424
||||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| |
Sbjct 1035799 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 1035740
Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484
|| |||||| ||| | || || || ||| || || || |||| | || ||
Sbjct 1035739 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 1035680
Query 63485 AA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543
|| ||| ||||| || || || || | || ||||| | || ||| || | || |
Sbjct 1035679 AACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTAT 1035621
Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603
| |||||||| || ||||| ||||| ||||| | | || ||| || | | |
Sbjct 1035620 CGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCT 1035564
Query 63604 GACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659
| || || || || ||| | || | || || ||||| || || || | ||
Sbjct 1035563 G-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAAC 1035505
Query 63660 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| | |||| ||||| |||||||| |||| || || || |||||| || || ||
Sbjct 1035504 GACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGC 1035446
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | ||| || || ||||| || | | |||| || ||| | | | |||
Sbjct 1035445 CACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTA 1035386
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||| |||| ||| || || || || || | ||| ||||| || || || | |||
Sbjct 1035385 TGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAAT 1035326
Query 63839 AACCGAGTTGAGTTTATC 63856
||||||| || | |||
Sbjct 1035325 GGCCGAGTTCAGCTCATC 1035308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946063121360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |