Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07-
28] 146 sequences; 30,106,281 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq59 102 2e-16
seq146 98.7 2e-15
>seq59
Length=4019949
Score = 102 bits (112), Expect = 2e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| ||||||
Sbjct 1279503 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 1279444
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 1279443 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTCTACCAGCACGAGAACATCCGTATCGC 1279385
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 1279384 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 1279325
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 1279324 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 1279274
Score = 96.9 bits (106), Expect = 7e-15
Identities = 123/167 (74%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| ||||| |||||||| || |
Sbjct 1278947 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTTTCCGGCG 1278888
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 1278887 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 1278829
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 1278828 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 1278782
Score = 87.8 bits (96), Expect = 4e-12
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 279703 CTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC- 279761
||||||| |||||||||||||||||||| || ||| |||||||| || | | |||
Sbjct 1279958 CTCTGTCCGGTGGTTGGAAGATGAAGCTTGCGCTCGCTCGCGCCGTT-TTCGAAAAGCCA 1279900
Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821
|| |||| ||||| || ||||| || || ||| ||||| || |||||| |||||
Sbjct 1279899 GACATCCTTCTGCTCGACGAGCCGACGAATCACTTGGACGTCAAGAACGTAAAGTGGCTC 1279840
Query 279822 GTGTCCTACCTAACCAG 279838
| | |||||| |||||
Sbjct 1279839 GAGGACTACCTCACCAG 1279823
>seq146
Length=1043783
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 193652 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 193593
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 193592 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 193533
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 193532 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 193473
Query 280354 GCTATGC 280360
| |||||
Sbjct 193472 GATATGC 193466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834877302786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |