Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07- 28] 146 sequences; 30,106,281 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq114 188 8e-43 seq59 91.5 2e-13 >seq114 Length=1292865 Score = 188 bits (208), Expect = 8e-43 Identities = 889/1394 (64%), Gaps = 31/1394 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || ||| |||| ||| || | ||| ||| Sbjct 1036800 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 1036741 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| || || | | ||| ||| || | ||| | | ||| || Sbjct 1036740 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 1036681 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| || || | ||| | ||| ||||||| || | || Sbjct 1036680 TTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGG 1036624 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AG 106169 ||| | || || || ||||| || ||||||| || | ||| | ||||| || Sbjct 1036623 AGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCAG 1036566 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | | || || ||||| || | || ||||| ||||| ||||| || | ||| | Sbjct 1036565 CAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAA 1036506 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 ||||||||| ||| || || |||| |||| | || |||| || |||| Sbjct 1036505 GCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGAC 1036446 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 106348 | | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 1036445 CGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACT 1036387 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || || | || | || ||| ||| || || || || | || |||| || Sbjct 1036386 GGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCG 1036327 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 1036326 TGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGC 1036267 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || |||| |||||| ||||| |||||| | | | |||||| | || || || ||| Sbjct 1036266 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 1036207 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 || || || ||||| || || || | |||||| || || ||||| |||| || ||| Sbjct 1036206 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 1036147 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| || ||| | || || || ||||| ||||| | || |||||| || | ||| | Sbjct 1036146 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 1036087 Query 106649 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGC 106707 | || | || | | ||||| | ||| | | ||| || ||| || | Sbjct 1036086 TTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTC 1036028 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 106766 | ||||| ||||| | || || ||||| || || || || || || | |||| Sbjct 1036027 CTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAG 1035969 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| || || || || |||| ||| || || || |||||||| || | | | Sbjct 1035968 TCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGA 1035909 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | ||| | ||| | ||||| | || ||||| || | || | ||||| || Sbjct 1035908 ACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCA 1035849 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 ||| || || ||||| |||||||| |||| || | || || | ||||| | Sbjct 1035848 TGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTGC 1035792 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || || || ||| |||| | || || |||||||| | || ||| | Sbjct 1035791 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 1035732 Query 107001 CTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 ||| || ||||| || | ||| | ||| | |||| || | | || | || Sbjct 1035731 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATG 1035674 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | |||||||| ||||| ||| ||||| ||||| | | || || | ||||| Sbjct 1035673 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 1035614 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||| | || ||| ||||| |||| | | |||||| | | ||||| ||| Sbjct 1035613 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 1035554 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGT 107237 ||||||||| |||| || ||||| | || || |||| ||| | ||||| | || Sbjct 1035553 GGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGT 1035495 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | | | |||||||||||||| || ||||||| ||||||||||| | Sbjct 1035494 TGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGA 1035435 Query 107298 ACATGTATTGGGGT 107311 ||| | ||| ||| Sbjct 1035434 TCATCTGTTGCGGT 1035421 >seq59 Length=4019949 Score = 91.5 bits (100), Expect = 2e-13 Identities = 325/501 (65%), Gaps = 18/501 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | || |||||| ||||| Sbjct 265795 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 265854 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | ||||| | | | | || || | | | || | Sbjct 265855 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTG-----CCGAGTGCTAACAGTA 265909 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 | ||||| | || | |||||||| | ||||| ||| |||||| || | || | Sbjct 265910 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGCT 265969 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 | ||||| || ||||| | |||| | | ||| ||| || ||||| | | |||| Sbjct 265970 TGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATGC 266029 Query 117221 CGTGGATAGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 117278 || | | | ||| | || | || || | | ||| || ||| || Sbjct 266030 TCTGCACAAGGGCCTGGT--TCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 266087 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || ||| | |||||||| ||||| || || || || ||||| || || | ||| Sbjct 266088 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 266147 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCT 117397 |||||| || ||||||| ||| | ||||| ||| || || || |||||||||||||||| Sbjct 266148 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCT 266206 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCAT 117456 | || ||||| |||| || || |||||| | |||| |||| ||| |||| Sbjct 266207 CAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCAT 266265 Query 117457 TTCATTGCCCATTTCGCCTTC 117477 || ||||| | |||||| Sbjct 266266 CGCAACGCCCAGTCAGCCTTC 266286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979723285040