Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07-
28] 146 sequences; 30,106,281 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq59 224 1e-53
seq81 156 6e-33
seq11 147 3e-30
seq66 91.5 2e-13
>seq59
Length=4019949
Score = 224 bits (248), Expect = 1e-53
Identities = 470/698 (67%), Gaps = 3/698 (0%)
Strand=Plus/Plus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| | | ||| || |||||||| || || || || ||||| || || ||| | | |
Sbjct 817048 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 817107
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
||||||| | ||||| ||| | || || || || ||||| ||||| || || | |||
Sbjct 817108 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 817167
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
||||| ||||| | || ||||| | || ||||| || || || ||| || ||||||
Sbjct 817168 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 817227
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| || || ||||| ||||| ||||| | || || |||||||| || |
Sbjct 817228 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 817287
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589
|| |||| ||||| ||| ||| | | | ||| | || | | || | |||||
Sbjct 817288 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 817344
Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649
| || || || || | || ||| |||| || || | || || || || || |
Sbjct 817345 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 817404
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||| | | | |||||| ||||| || || || | | | ||| || || || |
Sbjct 817405 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 817464
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || || || || || || || |||| || || || ||||| || || ||||||||
Sbjct 817465 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 817524
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| ||||| || || ||| || | || ||||| || || || || || || |||
Sbjct 817525 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 817584
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| || ||||| |||||||| | || | || ||||| | ||||| ||||| |||
Sbjct 817585 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 817644
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
|||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| |
Sbjct 817645 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 817704
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| ||||| ||||| | |||||||| || |||||
Sbjct 817705 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 817742
>seq81
Length=1972082
Score = 156 bits (172), Expect = 6e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || || |||||||||||||||||||| ||||| ||||| || | || |
Sbjct 1265306 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 1265247
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || |||||||||||||||||||| || |||||||| | ||||| || || ||
Sbjct 1265246 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 1265187
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || || || || ||||| | || |||||| |||| |||||| ||||| ||
Sbjct 1265186 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 1265127
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | ||||| ||||||
Sbjct 1265126 CTCGTCCTCCGTCTTCGTGGTGGT 1265103
Score = 150 bits (166), Expect = 2e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || || || || || || |||||||||||||| ||||
Sbjct 1265107 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 1265048
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| ||||| ||||| || |||| | ||||| || || ||||| || || ||||| |
Sbjct 1265047 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 1264988
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || |||||||| || || ||||| || ||||| ||||| || | || |
Sbjct 1264987 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACT 1264928
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || || || || ||||| ||| | || || | || || ||||||
Sbjct 1264927 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 1264875
>seq11
Length=1026328
Score = 147 bits (162), Expect = 3e-30
Identities = 196/272 (72%), Gaps = 3/272 (1%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || |||||||||| ||| || |||| || || |||||||||| ||| ||
Sbjct 862801 ACCGTCCCGGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 862742
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | || ||||| || ||||| || ||||| || || ||||||
Sbjct 862741 GCCGGACTCAACGTTCTGCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 862682
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| ||| | || ||| || | |||| ||||| |||||||||
Sbjct 862681 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 862622
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| ||||| | ||| | || ||| | ||| || |||||||| |||
Sbjct 862621 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 862562
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| || ||| | |||||| | ||||||||
Sbjct 862561 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 862530
Score = 107 bits (118), Expect = 3e-18
Identities = 251/375 (67%), Gaps = 8/375 (2%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118
||||| ||||| || | || || || || |||||||| |||||||| || | ||||
Sbjct 862350 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 862293
Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178
||||||| | | || || ||||| | || || || || ||| | || | || |
Sbjct 862292 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 862233
Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236
||||||| ||||| || || | ||| | | || | || | || | || ||
Sbjct 862232 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 862175
Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296
|| || || || |||||| || || ||| |||||||| || || || |||||
Sbjct 862174 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 862115
Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356
|| || || || |||||||| ||||| || || | || || ||||||||| ||
Sbjct 862114 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 862055
Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416
| | | || | |||||||| ||||| || || || || ||||| |||||||||||
Sbjct 862054 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTTCAGGC 861995
Query 196417 TGCTATTCTCTCAGG 196431
| ||| ||||| ||
Sbjct 861994 CGGTATCCTCTCTGG 861980
>seq66
Length=381649
Score = 91.5 bits (100), Expect = 2e-13
Identities = 221/331 (67%), Gaps = 13/331 (4%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||| || || || | | | || ||| || | | ||||| || ||
Sbjct 117952 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 117893
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || | || || || || |||||||||| | || ||
Sbjct 117892 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 117833
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| || | | |||| ||||| || || || || | || || || ||
Sbjct 117832 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 117773
Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896
||||||| ||||||| || |||| | ||| ||| || |||||||||||||
Sbjct 117772 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 117721
Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956
| || |||||||| | | | | | || ||| | ||||| || |||| || || |
Sbjct 117720 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 117661
Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|||| || ||||| |||||||| || |||||
Sbjct 117660 GTGACACCCATCTTGGTGGTGAGGACTTCGA 117630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861199401120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |