Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07- 28] 146 sequences; 30,106,281 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq69 111 1e-19 >seq69 Length=233662 Score = 111 bits (122), Expect = 1e-19 Identities = 196/286 (69%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 ||||||| ||||| | || ||| || | || |||||| |||||| ||||| || Sbjct 64882 CAGTCTCGGGGTTCTTGCAGTCCTTGCAGAGGACGAACTTGTTGATGAAGCCATCGAGGT 64941 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||| || ||||| | || || | ||||||| ||| | || |||| ||| | Sbjct 64942 AGTCTTGCAACTTGGTAGCCTCATGTGCACCGTTGATGATCCAGCGGTCGTCCTTGGGGT 65001 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | | | || || ||||| |||||| | || |||||||| | || | | ||| | Sbjct 65002 CAATATTGGTCTGGGCGCCGAGCTCGAAACCAAAGTACTTGATGACATAGCTTGGCGGGC 65061 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | | ||| | |||| | || || ||||||| |||||||||||| ||||| |||| Sbjct 65062 GGGCGAGCTGGTAAGCGACGTTGGCCAGATTGACGACGACAGTCTTGATACCGTTACCCT 65121 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 | || || ||||||| ||||||| ||| |||||||||||||| Sbjct 65122 TCCCCTCTACCTTGGACTGGATGCGCTCCATCTTGTAGCGGTAGAA 65167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840865399978