Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07- 28] 146 sequences; 30,106,281 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq59 167 3e-36 seq114 147 3e-30 >seq59 Length=4019949 Score = 167 bits (184), Expect = 3e-36 Identities = 551/850 (65%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| || ||||| || |||||||| || || || ||||| ||| || || || Sbjct 265789 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 265848 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || || || || || || || || | | || | | Sbjct 265849 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCTAACAGT 265908 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| || || ||||| |||||| | ||| | || ||||| || | || Sbjct 265909 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 265968 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||| ||||| || || | ||||| | ||||| |||||||| || || || Sbjct 265969 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 266027 Query 39566 GATGTT-ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | | || | | | |||| | | | ||| |||| | ||||||||| Sbjct 266028 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 266087 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 ||| || | ||||||||| | || | ||||| || |||||||| || | ||| Sbjct 266088 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 266147 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 |||||||| || || ||||| || || ||||||||||||||||| |||||||| || || Sbjct 266148 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 266207 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTT 39801 || || |||||||||| || | || | | | | | | | ||||| Sbjct 266208 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 266267 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | ||||| ||||| ||| | | || || || | || || ||||| || || | Sbjct 266268 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGT- 266326 Query 39862 ATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 ||||| | | || | | |||||||| || | || ||| | || || | Sbjct 266327 ATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGT 266386 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 ||||||| || ||| ||||| || ||||| || |||| ||| || | || || |||| Sbjct 266387 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCT 266446 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | || | || | || | | || || || || || ||||| ||||| || |||| Sbjct 266447 CAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 266506 Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGA 40097 | | || ||| || || || ||| ||| | | | || |||||||| | || Sbjct 266507 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGA 266566 Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157 ||| || || | ||| | || ||||||||||| || || ||||| ||||||||||||| Sbjct 266567 GATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACA 266626 Query 40158 TGTTCCATAT 40167 | | |||||| Sbjct 266627 TTTGCCATAT 266636 >seq114 Length=1292865 Score = 147 bits (162), Expect = 3e-30 Identities = 551/858 (64%), Gaps = 22/858 (3%) Strand=Plus/Minus Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336 || || ||||| || || || ||||||| | | | || | || ||||| || || Sbjct 1036266 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 1036207 Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396 | |||| | ||||| || || ||||| | |||||| ||||| ||| ||||||| Sbjct 1036206 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 1036147 Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456 ||||| ||||| || || || || || || |||| | |||| ||||| | ||| | Sbjct 1036146 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 1036087 Query 69457 ACCCTAGCATTTA-----TTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATAT 69510 | |||| | | |||| | ||| ||||||| | |||| | || Sbjct 1036086 TTCTGAGCACGAACCGTCTCACGGCCCTTGC----CTTCTCTCT--CATAACGCTCGTAC 1036033 Query 69511 AGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATC 69570 ||| | ||| || || || ||||||| || ||||| ||||| || || |||||| Sbjct 1036032 AGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATC 1035973 Query 69571 AATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCT 69630 | | ||| | | | | || || | |||||| |||||||||||||| ||||| Sbjct 1035972 AGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCG 1035913 Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690 || | ||| | | | | |||||| ||||| || || ||| || | ||| Sbjct 1035912 TAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAAC 1035853 Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750 | ||| | || | |||||| || || || || || || | | || || || || || Sbjct 1035852 TGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 1035793 Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || ||||| || | ||| | |||||||| |||||||||| ||||| || | || ||| Sbjct 1035792 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 1035733 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || ||| | || ||||| || ||| || ||| | || | || || || | Sbjct 1035732 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA 1035673 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| || || || || | || ||||| | ||||| || | || || || ||| Sbjct 1035672 AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATA 1035613 Query 69931 CCCTCTATGCTATCATCTATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATG 69986 || || ||||| ||||| ||||| |||||| | ||||| || || Sbjct 1035612 CCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTG 1035557 Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCA 70045 | || || ||| | || | ||| || || || || ||||| | || || | | | Sbjct 1035556 TGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTA 1035497 Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCA 70105 | |||||||| ||||| |||| ||| || || | |||||| || | || ||||||| Sbjct 1035496 G-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCA 1035438 Query 70106 TCAACATATGCTGAGGTC 70123 | | ||| || || |||| Sbjct 1035437 TGATCATCTGTTGCGGTC 1035420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907546391440