Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236755.1_202017-07-
28] 146 sequences; 30,106,281 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq114 197 2e-45
seq81 176 5e-39
seq59 127 2e-24
seq70 104 3e-17
seq124 98.7 1e-15
>seq114
Length=1292865
Score = 197 bits (218), Expect = 2e-45
Identities = 803/1242 (65%), Gaps = 39/1242 (3%)
Strand=Plus/Minus
Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598
||||||||||||| ||| | ||||| ||| | ||||| || | | | ||||||||
Sbjct 1036641 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 1036582
Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658
|| || | ||| || ||||| || || || ||| || || ||||| ||| ||||
Sbjct 1036581 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 1036522
Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717
|| | | || | | || | |||| || |||||| | || || | ||
Sbjct 1036521 AAAATCTGGATATTAAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 1036463
Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777
||| | ||||| || || | || || | | || || |||||||| ||| | ||
Sbjct 1036462 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 1036404
Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836
||| ||||| || | |||||| |||| | |||||| ||||||||| ||||| |
Sbjct 1036403 TTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 1036344
Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890
| || || || || |||||||||| ||||| || | |||| | | | |
Sbjct 1036343 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 1036284
Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950
| | || || || || ||||||||||| || || ||||| || | | | | |||
Sbjct 1036283 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACT 1036224
Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010
| | ||| || |||||||||||||| ||| || || || || || ||||| || ||
Sbjct 1036223 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCT 1036164
Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070
|| |||| ||||||||||| ||| | || || ||||||||| ||| | || ||
Sbjct 1036163 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 1036104
Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130
| || || | ||| || | | || ||| || ||| |||||||| | |||
Sbjct 1036103 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 1036044
Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
| |||| ||| || | ||||| | |||||| || || | || | ||||| |||
Sbjct 1036043 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCG 1035985
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245
|| ||||||||||| ||| ||| ||||| || ||| || ||| |||| | ||
Sbjct 1035984 TTGGGGCACATCAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 1035929
Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304
|| |||||||| ||| ||||| ||||| ||| || | || || | || |||||
Sbjct 1035928 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 1035870
Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364
||| | || | || | ||||| ||| |||||||| ||||| || || | ||| | |
Sbjct 1035869 TGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG 1035810
Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418
| ||| |||| ||||||||||| |||||||| ||||| |||| | || |
Sbjct 1035809 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTC 1035753
Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478
| | ||| || | | ||| | || ||||| || || | || || || |||
Sbjct 1035752 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGG 1035693
Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
| | | ||| ||| || |||||| || || || | ||| || ||| |||||
Sbjct 1035692 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 1035635
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|| | ||| || || || || || ||||| || | |||||| | | |||||| ||
Sbjct 1035634 TATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 1035575
Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654
| || | || | || | | | | || ||| |||| |||||||| | || || ||
Sbjct 1035574 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 1035517
Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714
|| || ||||| || || || || | | | ||| || || || |||
Sbjct 1035516 AAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGA 1035457
Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| |||| ||| |||||||| | ||| | || || |||||
Sbjct 1035456 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 1035415
>seq81
Length=1972082
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| |
Sbjct 1265102 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 1265043
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 1265042 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 1264983
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| ||
Sbjct 1264982 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 1264923
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || ||||| ||||| || | || | ||||| || |||||
Sbjct 1264922 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 1264876
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| ||||| || ||||||||||| || | ||| | ||| |||||
Sbjct 1265306 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 1265247
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| ||||| || ||||| || |||||||| || | ||||| || || |||
Sbjct 1265246 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 1265187
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||| | ||| ||||| | ||||| || | || ||||| |||||| |||
Sbjct 1265186 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 1265127
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | |||||||| |||||
Sbjct 1265126 CTCGTCCTCCGTCTTCGTGGTGG 1265104
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||||||||| || || || || || || |||
Sbjct 1264874 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 1264815
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||||||||| || || || ||||||
Sbjct 1264814 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 1264755
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||| | || || || | || || ||
Sbjct 1264754 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 1264695
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| |||||||| || | || ||||||| || || || |||
Sbjct 1264694 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 1264644
>seq59
Length=4019949
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | ||
Sbjct 1505722 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 1505663
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||| | ||| | ||| || || ||||||||||||||||| || || ||||||||
Sbjct 1505662 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 1505603
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
|||| | || || ||||| ||||| | ||||||| ||| ||||| | ||||| || |
Sbjct 1505602 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 1505543
Query 27588 CCAAAAGG 27595
||| ||||
Sbjct 1505542 CCAGAAGG 1505535
>seq70
Length=2041920
Score = 104 bits (114), Expect = 3e-17
Identities = 279/423 (66%), Gaps = 8/423 (2%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|||||| | ||||| ||||| || || || ||| | || || |||||| |
Sbjct 1468463 GACGGCTTGAAGCCGGGTCAGCGAAAAGTCATGTACACATGTTTCCGCCGCAACCTGAAG 1468522
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || | ||||||| | ||||| | || | || | | | || || || | ||
Sbjct 1468523 AAAGATGTCAAGGTGGTGGAGCTGGCTGGTTCAGTCTCCGGCCTCACCGCATACCCGTAC 1468582
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
|| ||| | || || ||| ||||| || || ||||||||||| || ||| | ||
Sbjct 1468583 GGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCAAC 1468642
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
||| ||||| | |||||||| ||| | ||||| | || || |||||||| |||
Sbjct 1468643 AACATGAACATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGTGGCAACGAT 1468702
Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279
|| || || | |||||||| | ||| | ||||| ||| | ||| | || ||| ||
Sbjct 1468703 GCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATCTT 1468758
Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339
||| | || || ||| |||| | |||||| || ||||| || |||| ||
Sbjct 1468759 TCACCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAACC 1468818
Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399
|| | | || ||| | | ||||||||| || | |||||||| || |||||||||||
Sbjct 1468819 GGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGTGCTGATGGCATCGGAAC 1468878
Query 32400 GGG 32402
||
Sbjct 1468879 CGG 1468881
>seq124
Length=1192383
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || ||||||||||| | || || || || ||||| ||||||
Sbjct 989505 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 989446
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || | || ||||| ||| || || || ||| |
Sbjct 989445 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 989386
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 989385 CGTCTGCGTGGTGG 989372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309359183520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |