Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq220 131 1e-25
seq331 89.7 4e-13
>seq220
Length=1802977
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || || ||||| || |||||||| ||| || ||| || ||||||
Sbjct 1399396 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 1399455
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || || | || || |||||||| || || || || |||||||||||
Sbjct 1399456 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 1399515
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| || ||||||||||| ||| | || ||
Sbjct 1399516 GATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTT 1399575
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||||| || || || ||||||||
Sbjct 1399576 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 1399605
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | || ||||||||| | || ||||| || || |||||||||||
Sbjct 1399151 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 1399210
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||||| ||||| || || ||| |||||||||||||||| || || ||
Sbjct 1399211 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 1399270
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
||||||||||||||| || ||| || || | |||| ||||| | || | || ||
Sbjct 1399271 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGAT-TCCAC 1399329
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || | || |||||||| || || || || ||||| |||||
Sbjct 1399330 TTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1399377
>seq331
Length=1764132
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | ||||| |||||| | ||| ||||||||| ||||
Sbjct 250650 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250591
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| ||||||||| || || || || ||||||||||| || || || || | |||
Sbjct 250590 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 250531
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||| | ||||||||||| || | || ||||| || || || ||||| ||
Sbjct 250530 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 250472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827988987552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |