Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq220 98.7 8e-16
seq435 93.3 3e-14
seq331 89.7 4e-13
>seq220
Length=1802977
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || || ||||| |||||||||||| ||| ||| | || ||
Sbjct 1399397 ACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCG 1399456
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | |||||||||||||
Sbjct 1399457 AGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 1399516
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| || ||||||
Sbjct 1399517 ATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 1399576
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||| || ||||| |||||
Sbjct 1399577 CCGGTGAGAGTCTTGACGAAGATCTGCAT 1399605
>seq435
Length=1163839
Score = 93.3 bits (102), Expect = 3e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||||||||||||||||||||||||||| || ||| | || || || ||
Sbjct 203266 GTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 203207
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| |||||||| ||||| ||||| ||||| || || | |||||||||||
Sbjct 203206 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 203156
>seq331
Length=1764132
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 45141 TGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGG 45200
||| | ||||||| |||||||||||| || |||| | || |||| || ||||| |
Sbjct 250658 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250599
Query 45201 CGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAA 45260
|||| ||||| ||||| ||||| || || | |||||||||||| || || ||| |
Sbjct 250598 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250539
Query 45261 CCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCT 45320
| | | | |||| | ||| ||||| | || || |||||||| || || ||||
Sbjct 250538 CATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCT 250479
Query 45321 TCACAAAGATTTGC 45334
| || ||| | |||
Sbjct 250478 TTACGAAGCTGTGC 250465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073004369576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |