Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq253 435 3e-117 seq331 188 6e-43 seq220 111 1e-19 >seq253 Length=310610 Score = 435 bits (482), Expect = 3e-117 Identities = 1034/1547 (67%), Gaps = 40/1547 (3%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | ||| || || || |||||||||| |||| | | Sbjct 233763 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 233822 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || || |||| ||||| | |||||| || || ||||||||||| | Sbjct 233823 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 233882 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || | |||||| | |||||||| Sbjct 233883 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 233942 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 | || |||| || ||| ||| ||||||| ||||| || | | |||| |||| | Sbjct 233943 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 233998 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||| ||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 233999 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 234057 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 | || | | ||| || ||||| || || | | || | || ||| ||||| Sbjct 234058 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGA 234117 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | ||||| || | || ||| || || || | ||| | || || | || Sbjct 234118 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 234173 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923 | || ||||||| | || | |||| |||||| || | || || | || Sbjct 234174 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGAT 234231 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 ||||| || |||||| ||| | || || | ||| || | | || Sbjct 234232 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 234291 Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 ||| |||| | |||| || | || | || | || | ||| || |||||| Sbjct 234292 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 234349 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| ||| | | |||||| | || || || || | ||| | | Sbjct 234350 CAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 234409 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| | ||| |||| ||||| || || ||| | |||||||| || ||| Sbjct 234410 TTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 234469 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || ||||| |||||| ||||| ||||| || || ||| || ||||||| || Sbjct 234470 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 234529 Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| | Sbjct 234530 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 234588 Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337 ||||||| || | ||| || || ||| | || ||||| ||| |||| | || Sbjct 234589 ACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTT 234648 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 | ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| || Sbjct 234649 CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC 234708 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 || || || || || || |||||| | |||| || | || ||||| ||||| Sbjct 234709 ACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATG 234768 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||| Sbjct 234769 CCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTA 234828 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 ||| || |||||||| || |||| |||||| || || ||||||||||| | |||| | Sbjct 234829 ACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGT 234888 Query 23578 GCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 | |||||| | || ||| | || | | ||||||||| || | ||| || || || Sbjct 234889 G-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAG 234947 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 | || || ||||| || ||| || || || |||||||| || || |||||||| | Sbjct 234948 CGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCAT 235007 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 | || | || |||||||| || || | | ||||| | || ||| | || ||| | Sbjct 235008 CCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAA 235067 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814 |||| || || || || ||||| | || |||||| ||| ||||| || || || || Sbjct 235068 GTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCAATCGC 235125 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 || |||||||| || || || || |||| || || ||||| ||||| | ||| ||||| Sbjct 235126 TGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCT 235185 Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 |||| ||| | ||||| |||| ||| || ||||| || | || || || || || Sbjct 235186 CTCGGCAACCTT---GCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCC 235242 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || || | ||||| ||||| || || | || |||||||| |||| Sbjct 235243 GAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 235289 >seq331 Length=1764132 Score = 188 bits (208), Expect = 6e-43 Identities = 562/858 (66%), Gaps = 23/858 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | || || | || ||| Sbjct 1497264 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 1497323 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || || || || || | Sbjct 1497324 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 1497383 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| | Sbjct 1497384 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 1497443 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| | ||||||| ||||||| ||||| || || | || Sbjct 1497444 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 1497503 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | ||||| || ||||||||||| ||| | | || ||| | Sbjct 1497504 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 1497563 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | ||| | || |||||||| || ||||| | || || ||| || |||||| | Sbjct 1497564 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 1497621 Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 | ||| | | |||||| | ||| | | || |||||| | || || Sbjct 1497622 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 1497677 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || ||||| ||||| || || ||||| || || || ||| || Sbjct 1497678 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 1497737 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 |||||||| || || ||| |||| || || || |||||| | || || || || ||| Sbjct 1497738 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 1497797 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || | || || || || || ||||| ||| ||| || | || || |||| | | Sbjct 1497798 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 1497857 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 | | | | ||| ||||||||||| ||| ||||||| | ||||| | || || Sbjct 1497858 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 1497917 Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || | || | || || |||||| || | |||||| | |||||||||| Sbjct 1497918 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAGT 1497975 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || ||||| | || || | | ||| | ||| || |||||| | | || Sbjct 1497976 TCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 1498033 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396 || || || || ||| | || ||||| | |||||||| ||||| ||||| || Sbjct 1498034 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 1498093 Query 58397 aGTTAGCGAATATCAAAA 58414 ||| |||| || || || Sbjct 1498094 TGTTGGCGAGTACCAGAA 1498111 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||||||||| || || ||||| || ||||| |||| || || || ||||| || Sbjct 250472 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 250531 Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | |||| |||| || | | ||||||||| || | || || |||||||||||| Sbjct 250532 GACAATGTCA---AGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 250588 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | || |||||||| || |||||||| || Sbjct 250589 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 250617 >seq220 Length=1802977 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | ||| Sbjct 1399377 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 1399318 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| ||| | || || ||||| Sbjct 1399317 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 1399259 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 1399258 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 1399199 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || ||||| || |||| || Sbjct 1399198 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 1399166 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || |||||| |||| || || | | Sbjct 1399605 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 1399546 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 1399545 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 1399486 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || | ||| || ||| || ||| Sbjct 1399485 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 1399426 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||||||||| || |||| ||| | || | || |||| Sbjct 1399425 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 1399377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763859131520