Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq253 129 1e-24
>seq253
Length=310610
Score = 129 bits (142), Expect = 1e-24
Identities = 418/638 (66%), Gaps = 12/638 (2%)
Strand=Plus/Plus
Query 94393 CCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCG 94452
|| |||||||| |||||| |||||||| | |||| ||||| || || | || ||
Sbjct 234542 CCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCC 234601
Query 94453 GAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCC-TTC-ACTC 94510
|| || |||||||| |||| |||||||||||| | |||| | || | ||| || |
Sbjct 234602 GACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTG--CCGTTCTGTTCGACAC 234659
Query 94511 TCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTT 94570
|| ||| |||||||| | | ||||| ||| ||| | ||| | || | | ||||
Sbjct 234660 GCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTT 234719
Query 94571 CATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAA 94630
| || || ||||| | ||| || || | | | ||||| |||||| ||
Sbjct 234720 CCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAA 234779
Query 94631 TATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGA 94690
|||||||| ||| ||| | ||||| || |||||| ||| | ||| |
Sbjct 234780 GGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGT 234839
Query 94691 CGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGG--GTACCACTCCATGACGA-AA 94747
|||| ||| | | || | | | ||||| | ||| || || | || || ||
Sbjct 234840 TGTTATAGACTCGTAGCATTGGTACAAGACC--GTTGGATGTGCCGTTTG-TGCCGCCAA 234896
Query 94748 TGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807
|| ||| | ||||| | | |||| || | || | || ||||| ||||||
Sbjct 234897 TGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGG 234956
Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867
|||| || || ||| || ||||| || ||||| |||||||| ||||| | | |
Sbjct 234957 AGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGG 235016
Query 94868 CCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGG 94926
||| | |||||| || | || || | |||| || ||| | | || ||||| ||
Sbjct 235017 CCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGG-GTACCAGCACTGAAAAGTGTTGGC 235075
Query 94927 GAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATG 94986
|||||||| || || || | | ||||||| | ||||| ||||| | | || |||
Sbjct 235076 GAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATG 235135
Query 94987 TCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || ||||||||||||||||||||||| |||||
Sbjct 235136 TCTTCCCCATGAATGCCGACAGCCACACGCATGATCAT 235173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578218355480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |