Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq331 93.3 3e-14 >seq331 Length=1764132 Score = 93.3 bits (102), Expect = 3e-14 Identities = 274/420 (65%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | || ||||| || ||||| || || | || ||||| || ||||| || || Sbjct 1497669 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATC 1497728 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||||||||||||| |||||| | ||| | | || || |||||| | || | Sbjct 1497729 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCC 1497788 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 ||||| || || | ||| ||||| || || | ||||| ||| || ||||| Sbjct 1497789 CGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAG 1497848 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 ||| |||| | || || ||||| | || ||||| || ||| || ||| Sbjct 1497849 CCGAACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTC 1497908 Query 22981 TTCCAAGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039 || ||| || | | | || || || || ||||| || | ||| || || Sbjct 1497909 TTGACAGACGCTCTTCCATGCA-AGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATA 1497967 Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 ||| |||| || || |||||||| || || || || | ||| | || |||| Sbjct 1497968 CATTGAGTTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGC 1498027 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 |||| || || || |||||||| |||||| | | || || || |||||||| || Sbjct 1498028 CACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGA 1498087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231620231768