Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq253 167 3e-36
>seq253
Length=310610
Score = 167 bits (184), Expect = 3e-36
Identities = 628/972 (65%), Gaps = 26/972 (3%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| |||||||| || || || ||||||| | | | | || | || || ||||||||
Sbjct 234338 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 234397
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
| ||| | ||| ||||| || | ||| | ||||| ||||| ||| || |||
Sbjct 234398 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234457
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC- 79799
|| || |||||||| || || || || || |||| | || | ||| || | ||| |
Sbjct 234458 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 234517
Query 79800 ----GA-CTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
|| | ||| || | | | | | | | |||||| || || | ||
Sbjct 234518 TTCTGAGCACGAACCGTC-TCACGGCCCT-----TGCCTTCTCTCTCATAACGCTCGTAC 234571
Query 79855 AA-TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| || || ||||||||| || ||||||| | ||||| ||||||| || |||||
Sbjct 234572 AGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACAT 234630
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
|| | ||| || | | | || || | |||||||||||| |||||||| |||||
Sbjct 234631 CAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGC 234690
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| | ||| | | | | || || ||||| ||||| ||| || | |||
Sbjct 234691 GTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAA 234750
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| ||| | || | ||||||||| || | ||| ||||| | | | || || || |||||
Sbjct 234751 CTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTT 234810
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| ||||| |||| | |||||| | || |||
Sbjct 234811 GCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACC 234870
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA-TTG 80212
|||||||| || || || ||| || || || |||| | || || || ||
Sbjct 234871 GTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATG 234930
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| ||||| || || || || | || ||||| | || ||| || | ||||| ||||
Sbjct 234931 A-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 234989
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| ||||| ||||| | | || ||| || | | || || |
Sbjct 234990 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTAGCTG-CGCC 235045
Query 80333 T----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-G 80387
| || || ||| | || | || || ||||| || || || | || |||| |
Sbjct 235046 TGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATG 235105
Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||| ||||| |||||||| |||| ||| || || |||||| || || || |||||
Sbjct 235106 TAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACG 235164
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507
||| | ||| || || ||||| || | | |||| | ||| | | | ||| |||
Sbjct 235165 CATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGATCG 235224
Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567
|||| ||| || || || || || | ||| ||||| || || || | ||| ||||
Sbjct 235225 CTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGA 235284
Query 80568 GTTGAGTTTATC 80579
||| || | |||
Sbjct 235285 GTTCAGCTCATC 235296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264705867840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |