Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq331 235 8e-57 seq253 165 1e-35 >seq331 Length=1764132 Score = 235 bits (260), Expect = 8e-57 Identities = 580/864 (67%), Gaps = 33/864 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| ||||||| || ||||| | || ||| | |||||| Sbjct 1497264 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 1497323 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || | | || || ||| || || || Sbjct 1497324 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 1497383 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| |||||||| || |||||||| || || || || || Sbjct 1497384 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 1497442 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| || || || |||| ||||| ||||| ||||| ||||||| Sbjct 1497443 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 1497501 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | ||||| || | || || || || || | ||||| |||| || Sbjct 1497502 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 1497561 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 ||| || |||| | || || || || ||||||| | || | || || | |||| Sbjct 1497562 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 1497618 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 || | |||| | | || ||||| |||| | || || | | |||| | | || | | Sbjct 1497619 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 1497678 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 |||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| | Sbjct 1497679 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 1497738 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||| || || |||||| |||| || || | |||||| | || || || || |||| Sbjct 1497739 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 1497798 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612 || | ||| ||||| ||| || ||||| |||| ||||| | | || || Sbjct 1497799 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 1497852 Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 |||| | || || ||||| | ||||| ||||| | ||| || || |||| Sbjct 1497853 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 1497906 Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729 | | || || | || || || | | || |||||| || | || |||| | Sbjct 1497907 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 1497965 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786 ||||| ||||| || || ||||| ||||||| | | ||| ||||| | ||| Sbjct 1497966 TACATTGAGTTCGTCGCCGATCGCCTACTGT---TGGCACTCGGCAACAAGAAGTTCTAC 1498022 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||||||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 1498023 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 1498082 Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||||| || |||||||| Sbjct 1498083 TTCGAGAAGCGTGTTGGCGAGTAC 1498106 >seq253 Length=310610 Score = 165 bits (182), Expect = 1e-35 Identities = 382/568 (67%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 |||||||||| ||| || || || |||||||| || | || || || || | || Sbjct 234888 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTG-CTCG 234830 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 |||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || || Sbjct 234829 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 234770 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| || ||||| | | || || || | ||||| ||| ||| ||||| | || Sbjct 234769 GCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 234710 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || ||||| || || |||||| | || ||| | || ||| |||| ||| | | Sbjct 234709 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 234650 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| |||| || ||||||||| || | || |||||||| ||| | || Sbjct 234649 GAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTTACGG 234590 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAG 97164 || ||||| ||| |||| | || ||| ||| ||| | ||||||||| Sbjct 234589 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 234530 Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 ||| ||| | || | ||| | || || | ||| ||| ||||| || || || | Sbjct 234529 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 234471 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283 |||||| |||||||| ||| || ||||| ||||| || | | ||||| ||||||| Sbjct 234470 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGG-CACCATC 234412 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343 ||| |||| ||| ||||||| || || | |||||| | |||| || ||| || || Sbjct 234411 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTC 234352 Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371 ||| |||||| ||| | |||||||| Sbjct 234351 TGCAATCTGGCTTCGCTTGCTCTGCCCA 234324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054975962560