Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq253 304 3e-77 seq402 89.7 1e-12 seq331 89.7 1e-12 seq424 87.8 5e-12 >seq253 Length=310610 Score = 304 bits (336), Expect = 3e-77 Identities = 1157/1795 (64%), Gaps = 52/1795 (3%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| || Sbjct 235245 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 235187 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | ||||| || ||| | |||||||| ||| | || || ||| | || |||| || Sbjct 235186 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 235127 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564 |||||||| ||||| || ||| || |||| ||| ||||| || || ||||| Sbjct 235126 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 235072 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | || |||||| || | | | ||| | | || ||||| | | ||| Sbjct 235071 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 235012 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| || ||||||| || || || |||| ||||| | || |||||| Sbjct 235011 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 234952 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 || || ||||| |||||| | | ||||| | | || |||| | |||||| | Sbjct 234951 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 234893 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||||| || || || || || || || ||||| || || | | |||| ||||| Sbjct 234892 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 234833 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||||||||| ||||| ||| || ||||| || || || ||||| Sbjct 234832 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 234773 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| || | | |||| | || || || || ||| ||||| || ||| | Sbjct 234772 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 234713 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || ||| ||||||| || || ||| || | || | |||||| |||| || || Sbjct 234712 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 234653 Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 ||| | | |||| | || | ||||| ||||||| || ||||| || ||||| | Sbjct 234652 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 234594 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 |||||||| | | || ||||| ||||| || || |||| ||| ||| Sbjct 234593 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 234534 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | ||| || ||||| |||||| ||| || | || |||||| ||||| || |||| Sbjct 234533 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 234474 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | || ||||||| || | |||||||||| ||| ||| || | ||||| || | Sbjct 234473 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 234414 Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 ||| ||||| || | || || ||||| || || ||| | ||||| || ||| | Sbjct 234413 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 234357 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331 | || || || || || ||| | || || || | | || | || ||| Sbjct 234356 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 234299 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 ||||||| | || | ||| | || || ||| | | || | || || ||||| Sbjct 234298 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 234239 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450 ||||| | || || || ||| | || || || ||| | | || | || || || | Sbjct 234238 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 234180 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | |||||||||||||| | || || ||||| | || || ||| ||| |||| | Sbjct 234179 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 234120 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | |||||||| || | || |||| |||| ||||| || || ||| ||| || Sbjct 234119 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTC 234060 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 | ||||| || || | || | | || ||| || || || || | Sbjct 234059 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 234000 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | |||||||| | |||||| || | ||| || || | | || ||| Sbjct 233999 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 233940 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741 |||||| ||| || ||| | |||| |||| ||| |||||||| | Sbjct 233939 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 233886 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 ||||| ||||| ||||| || || || || | |||||| | || |||||||||| Sbjct 233885 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 233829 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | |||||||| |||| || || || || | | || || || | ||| | Sbjct 233828 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 233769 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || | || | |||||||| |||||| || || ||| || | |||||||| Sbjct 233768 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 233709 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || |||||||| | ||||| || | ||| ||| || ||||||| || || | Sbjct 233708 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 233649 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || | | ||||| ||||| ||||| || | ||| | || | | ||||| || | Sbjct 233648 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 233589 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || |||||||||||| ||| ||| || ||| | |||| |||||||| Sbjct 233588 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 233529 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| ||| || ||||| |||||| ||||| || Sbjct 233528 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 233474 >seq402 Length=1649081 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474 |||| || | || ||||| || || || || || || | ||||| || || || || | Sbjct 1544977 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 1545036 Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532 |||| ||| || ||| || ||||| || || ||||| ||||||||||| |||||||| Sbjct 1545037 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 1545094 Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591 || || ||||||||| |||||| || || ||| || ||| || | || Sbjct 1545095 AGCCGAATACAAAACCTGCCACGACGACTACACCGGCCAAGGAGTCGACCAACTAGCCGA 1545154 Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651 | || || | || | ||||| ||||| | |||||| || || | ||||| |||| Sbjct 1545155 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 1545213 Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692 |||| | | | |||||||| || ||||| || ||| Sbjct 1545214 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 1545254 >seq331 Length=1764132 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496 ||||| || |||||| || |||||| |||| |||| ||||||| ||||| Sbjct 1497615 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 1497673 Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556 ||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| || Sbjct 1497674 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 1497733 Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616 ||| || ||||||| | ||| | || || || || || || ||| | || ||| || Sbjct 1497734 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 1497793 Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||| | || || || || || || Sbjct 1497794 TGAGGGCATGCACACAGACTTCGCCTG 1497820 >seq424 Length=1446682 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||| | || | ||| || ||| ||| ||||| ||||| || |||| ||| Sbjct 641653 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 641712 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||||||||||||| | | |||||| || || |||||||||| |||||||||||| || Sbjct 641713 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 641772 Query 65991 CATTGCAGAAAAGAAAAACTC 66011 ||| || ||||| ||||| Sbjct 641773 CATGGCGTGGAAGAAGAACTC 641793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345985156592