Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq331 111 3e-19
seq413 98.7 2e-15
>seq331
Length=1764132
Score = 111 bits (122), Expect = 3e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 279378 GCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGG 279437
|||||||||| ||||| ||||| ||| || | ||| |||||||||| | ||
Sbjct 470359 GCATATGGTGCAAAGATCCTGCTCAACCAGACACATCTCCGACTCAAGCGTGGTCAGCGT 470418
Query 279438 TATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAAC 279497
|||||||| |||||||||| ||| | || |||| ||| || ||||||||||| |||
Sbjct 470419 TATGGTCTTCTCGGTCCCAACGGATCTGGCAAGACCACGCTCATGCGCGCCATCAACAAC 470478
Query 279498 GGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556
| ||| | || ||||| ||||| ||| ||||| | ||| ||||| || ||||||||
Sbjct 470479 GAGCAGGTCGAGGGATTCCCTAA-GCAGGACGAGGTTAAGACCGTGTACGTCGAGCACGA 470537
Query 279557 CATCGACTCC 279566
| | || |||
Sbjct 470538 CTTGGATTCC 470547
Score = 102 bits (112), Expect = 2e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| || |||| |||||||| || |||||||| || |||||||| || |||| ||||||
Sbjct 471142 TCTCGTATTGCCGTCATTGGGCCAAATGGTGCCGGCAAGTCTACTCTCGTCAACGTCCTG 471201
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | || || |||| || ||| | |||| ||||| || || ||
Sbjct 471202 ACTGGTGAG-CTCATCCCGACTGCCGGCGACGTATACCAGCACGAGAACATCCGTATCGC 471260
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||||||| |||||||| |||| || || | ||| || | |
Sbjct 471261 CTACATCAAGCAGCACGCTTTCGCGCACATCGACCACCATCTCGAGAAGACCCCGTCCGA 471320
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
|||||| |||||||| | | || | ||| |||||| ||| | |||| ||
Sbjct 471321 ATACATCCAGTGGCGGT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 471371
Score = 91.5 bits (100), Expect = 3e-13
Identities = 122/167 (73%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| | ||||||| ||||| ||||| || || |
Sbjct 471698 CCAACTTCGGTCTGGACGCTGAGCTCGTGTCTCACTCCCGCATGAAGGGTCTCTCCGGCG 471757
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | || ||| ||| |||| |||||| | |||||| ||||||||
Sbjct 471758 GTCAGCGTGTCAAGGTCGTGCTCGCCGCATGCTC-GTGGCAGCGTCCTCACTTGATCGTT 471816
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|| |||||||| ||||||||||| ||||| || ||||| |||||
Sbjct 471817 CTTGACGAGCCAACCAACTATCTCGACCGTGACTCACTGGGTGCTCT 471863
Score = 86.0 bits (94), Expect = 1e-11
Identities = 104/139 (75%), Gaps = 6/139 (4%)
Strand=Plus/Plus
Query 279703 CTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTC-TACTGCGTG 279759
||||||| |||||||||||||||||||| || ||| | |||||| |||| | ||
Sbjct 470687 CTCTGTCCGGTGGTTGGAAGATGAAGCTTGCGCTCGCCCGCGCCGTATTCGAAAAGC--- 470743
Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819
| ||| |||| ||||| || ||||| || || ||| ||||| || |||||| ||||
Sbjct 470744 CAGATATCCTTCTGCTCGACGAGCCGACGAATCACTTGGACGTCAAGAACGTAAAGTGGC 470803
Query 279820 TAGTGTCCTACCTAACCAG 279838
| | | |||||| |||||
Sbjct 470804 TCGAGGACTACCTCACCAG 470822
>seq413
Length=1507138
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||||||||| || ||||| || | ||||| ||| ||||||||||| |
Sbjct 465747 TCATTGGGCCCAATGGTGCTGGCAAGTCGACGTTGATCAAGGTCTTGACTGGCGAGGTCA 465688
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| || || || ||| ||||||||| |||| || | ||| || ||||
Sbjct 465687 TTCCCCAAGAAGGCAAGGTCGAGAAACATCCCAACTTGCGAATTGGCTACATCAAGCAGC 465628
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
|||| || | ||| | |||| || || || | ||| || ||||| ||| |||||||||
Sbjct 465627 ACGCGCTCGAGCACGTGGAGATGCATCTCGAAAAGACGCCCAACCAGTACCTTCAGTGGC 465568
Query 280354 GCTATGC 280360
| |||||
Sbjct 465567 GATATGC 465561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027830794863496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |