Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq331 295 1e-74 seq253 194 3e-44 seq44 87.8 3e-12 >seq331 Length=1764132 Score = 295 bits (326), Expect = 1e-74 Identities = 584/854 (68%), Gaps = 34/854 (4%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367 |||||||| ||||| || ||| |||||| || ||||||||||| ||| | ||||| Sbjct 1497273 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 1497332 Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421 |||| | || | || ||| | | |||||| || ||| || | || | Sbjct 1497333 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 1497388 Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481 || || ||||||||||| || || ||||| ||||| |||||||| | | | |||| Sbjct 1497389 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 1497448 Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 ||||||||| | ||||| || |||||||||||||||||||| || ||||| Sbjct 1497449 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 1497508 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | ||||| ||| || || || || | || |||||| || || |||| Sbjct 1497509 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 1497568 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | |||||||| ||||| || | || || |||||| | |||||| |||||||| Sbjct 1497569 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 1497628 Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | | ||||| | | || | | || |||| | | || | || ||| ||| Sbjct 1497629 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 1497687 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779 |||| ||||| ||||||||||| || | || || | ||||||||||| ||| | | Sbjct 1497688 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 1497747 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || || ||| |||| ||||| ||||||||||| |||||| | | || ||||| |||| Sbjct 1497748 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 1497806 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899 | ||||| |||||||| ||||||||| || || | | ||||||| ||| | Sbjct 1497807 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 1497863 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959 || | | ||||||||| |||||||| ||||||| |||||||| | || || |||| Sbjct 1497864 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGAC--AGACGCTC 1497921 Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 || || || | || |||||| | |||||||| | ||||| ||| ||||| Sbjct 1497922 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAGTTCGTCG 1497981 Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071 |||| | || |||| ||| ||| || | |||||||| | | || Sbjct 1497982 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 1498035 Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131 |||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| | Sbjct 1498036 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 1498095 Query 43132 TCGCCGACTACCAG 43145 | | ||| |||||| Sbjct 1498096 TTGGCGAGTACCAG 1498109 >seq253 Length=310610 Score = 194 bits (214), Expect = 3e-44 Identities = 480/722 (66%), Gaps = 21/722 (3%) Strand=Plus/Plus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||| |||||||| || ||||| || | | ||||| | ||||| ||||| | Sbjct 234341 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 234400 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 ||| || |||||||||||| || | || |||||| |||| |||| |||||||||| Sbjct 234401 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTG 234460 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || || ||||| || ||||||||| ||| || |||| | | ||| | | | Sbjct 234461 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 234520 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 ||| |||||| || ||||||| ||| ||| || || |||||| ||| | Sbjct 234521 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 234580 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985 |||||| || | || || || || ||||| || | |||||||| ||| ||| Sbjct 234581 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTG--GGGCACATCAGAGTCC 234638 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| | Sbjct 234639 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 234698 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 || | | | || ||| ||| |||||| | || |||| || | | || Sbjct 234699 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 234758 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| | ||||| ||||| | ||||| || | || || || ||||||||||| |||| Sbjct 234759 CGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 234818 Query 245166 GGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 ||| || | | ||||| | |||| ||| || || | || || | ||||| Sbjct 234819 GGT----CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTG 234874 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 || |||||| ||||| ||||| | ||| || |||||| |||| || ||||| Sbjct 234875 GATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATG 234930 Query 245282 ----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 || | ||||| |||| ||||||||| | ||| || |||||| ||| || || Sbjct 234931 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 234990 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGG 245396 || || |||||||| ||||||| | || |||||||| | ||||| | || ||| Sbjct 234991 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 235050 Query 245397 GG 245398 || Sbjct 235051 GG 235052 >seq44 Length=788059 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996 |||| ||||| |||||||||||||| || ||||||||||||||||||| || || Sbjct 59038 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 58980 Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054 ||| || | || | | || ||||||| | |||| || || |||||||| || |||| Sbjct 58979 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 58921 Query 243055 GGGAAGCCGCC 243065 ||||||| ||| Sbjct 58920 GGGAAGCTGCC 58910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333817266560