Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq220 113 5e-20
>seq220
Length=1802977
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || ||||||||||| | | || || |||| |||||||||||||||
Sbjct 1399181 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCG 1399240
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| ||||||||||| || || || || || || ||||| || ||| |||
Sbjct 1399241 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTG 1399300
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | |||||||| | || | |||||||||||| | ||
Sbjct 1399301 ACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTC 1399360
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||||||||||||
Sbjct 1399361 TTGACGAAAATTTGCAT 1399377
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| | || | ||||||||||| || |||||||| || | | || || | ||
Sbjct 1399393 AAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATC 1399452
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||||||||| ||| |||| || ||||||||||| || || || || || || ||
Sbjct 1399453 CTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 1399512
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | || || | || || || || | || | |||
Sbjct 1399513 CTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGT 1399572
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| | ||| || ||||| || |||||
Sbjct 1399573 CTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1399605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499641952024640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |