Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq220 122 8e-23
seq331 111 1e-19
>seq220
Length=1802977
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | || || ||||| || || ||||| ||| |
Sbjct 1399379 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1399438
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || ||||| || || || | |||| |||||||| || || ||
Sbjct 1399439 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1399498
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| ||| ||||| | |||| |||||| | ||||||
Sbjct 1399499 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 1399558
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| ||||| || || || ||||||||
Sbjct 1399559 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1399605
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| || | || ||||| || || || |||||||| | || ||
Sbjct 1399163 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCG 1399222
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || ||| |||| | |||||||| || || || ||||||||||||
Sbjct 1399223 TCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTG 1399282
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|| ||| || ||||| |||| |||| ||||| | || ||||||| || |
Sbjct 1399283 TCTTGGATCTTTGACTTGACGTTG-TCGATCGTGTCGGATGATTCCACTTCGAGTGTGAT 1399341
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||| || || || || ||||| |||||
Sbjct 1399342 GGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1399377
>seq331
Length=1764132
Score = 111 bits (122), Expect = 1e-19
Identities = 353/535 (66%), Gaps = 33/535 (6%)
Strand=Plus/Plus
Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATT---GAAA 47115
|||| | ||| || ||| | ||||| ||||| || ||||| || | ||| || |
Sbjct 1497589 TCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGCGTTGCGATGGATTTCTGACA 1497648
Query 47116 ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCT 47175
| ||| || || || ||| ||| | || || || ||| ||| ||||| ||||||
Sbjct 1497649 A-GAACTCGACATTC--GCCCTCCGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCT 1497705
Query 47176 TCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCA 47235
|||| || ||||| || || || | |||| | || | ||| |||| ||||
Sbjct 1497706 TCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCA 1497765
Query 47236 CGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-C 47294
| || |||||||| ||||| | || || ||| ||||||| |||| ||||| || |
Sbjct 1497766 CATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTC 1497825
Query 47295 TACTACAACACTAGAGTC-GATCAA-AAGTTGGACGTGCCCACCGT-CAGCGACATGTTT 47351
| | || | || || || ||| | || | || || ||| | ||| |
Sbjct 1497826 TGTT------CTCGCATCTGAAGAACAAGCCGAACCAGGCCCTTGTGCAGAG-CATCATC 1497878
Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG--AATCTTTAG 47409
|||| |||||| | || ||| |||||| || | || ||||| || || |||
Sbjct 1497879 ACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTC-- 1497936
Query 47410 TGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCG 47469
|||| |||||||| | | ||| | | ||||| || || |||||||| ||||| ||
Sbjct 1497937 TGGGGATGAACGCTGGCCTCATGTCACAATACATTGAGTTCGTCGCCGATCGCCTACTGT 1497996
Query 47470 T-----TCAGCTA-AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGA 47523
| || || | ||| ||| | ||| || || || || ||||| || |||
Sbjct 1497997 TGGCACTCGGCAACAAG------AAGTTCTACAACGCCACCAACCCCTTCGACTTCATGG 1498050
Query 47524 ACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
| ||||||||||| | |||||||||||||| ||||||||||| || ||||| ||
Sbjct 1498051 AGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 1498105
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | |||||| ||| || | ||| ||||||||| |||||
Sbjct 250650 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250591
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
|| |||||||| || || || || |||||||||||| ||| || ||||| | |||
Sbjct 250590 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 250531
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| |||||| | |||||| |||| || | || ||||| || || || ||||| ||
Sbjct 250530 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 250472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498089645440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |