Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq253 268 1e-66 seq331 111 2e-19 seq424 109 7e-19 >seq253 Length=310610 Score = 268 bits (296), Expect = 1e-66 Identities = 905/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Minus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || |||| || ||||||||||| ||||| | | | |||||| Sbjct 235173 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 235114 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || | ||||| | ||| |||| || || | ||||| || |||| ||||| Sbjct 235113 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235055 Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796 ||| ||| || | | | | ||| || ||| | | || | ||||| || || Sbjct 235054 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 234998 Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856 |||| || |||| || |||| ||||||| ||||| ||| ||||| ||||| Sbjct 234997 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 234938 Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914 || | || | || | |||| |||| || ||| || || | || ||||| || Sbjct 234937 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 234880 Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974 ||| | ||| || | |||||||| || || | |||| ||| || || || || || Sbjct 234879 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 234820 Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028 || | ||| ||||| || | | || | || |||| |||||||| ||||| || Sbjct 234819 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 234763 Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 234762 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 234704 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 234703 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234644 Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 || |||| |||| | || || || || || || ||||| || |||| ||||| | Sbjct 234643 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234585 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 |||| | | || ||| || ||| |||| | || || |||||| | | Sbjct 234584 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234525 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || | | ||| | ||||||||| || | || |||||||| || ||||| | || | Sbjct 234524 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234465 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 234464 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 234405 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 | || | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 234404 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 234345 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 234344 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 234285 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 |||| ||||| || || ||| |||||| ||||| |||| || || | || | Sbjct 234284 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 234225 Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 234224 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 234166 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684 ||| | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 234165 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 234107 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||||| | ||| | || |||||||| || ||||| || ||||||||||| | Sbjct 234106 CAAGGAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 234047 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 ||| | || ||| ||||| || || || | || ||||||| || || || Sbjct 234046 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 233987 Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | ||| || | || ||||||| ||| | ||| | || || ||||||| ||| Sbjct 233986 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 233930 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 ||||||| ||| || | ||| | || ||| ||| | | || || ||||| Sbjct 233929 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 233870 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | || Sbjct 233869 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 233810 Query 112982 CATCTA 112987 ||| || Sbjct 233809 CATTTA 233804 >seq331 Length=1764132 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 1497669 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 1497727 Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 1497728 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 1497787 Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| | ||| ||| || || Sbjct 1497788 CCGTGATGAGGGCATGCACACAGACTTCGC 1497817 >seq424 Length=1446682 Score = 109 bits (120), Expect = 7e-19 Identities = 224/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 80146 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 80205 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 80206 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 80264 Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908 | || |||| ||| ||| || | ||| || || ||||| || ||||| | Sbjct 80265 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 80322 Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968 ||| || ||||| ||||||||||| | | || | || |||| | || ||| Sbjct 80323 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 80382 Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028 | || ||| ||||| ||||| ||||||| |||||| || |||||| || || Sbjct 80383 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGT 80440 Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051 | |||||| |||||||| || || Sbjct 80441 CCTTCGTACCGGCCTTGTTGGCGTC 80465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738861768320