Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq253 241 2e-58 seq331 224 2e-53 >seq253 Length=310610 Score = 241 bits (266), Expect = 2e-58 Identities = 975/1517 (64%), Gaps = 47/1517 (3%) Strand=Plus/Plus Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746 || ||| | ||||| | |||| |||||| || || | | | |||||| ||||| | Sbjct 233542 CATATGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTG 233601 Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806 | ||| | | |||| || |||||| ||||||||| ||| | | |||||||| ||||| Sbjct 233602 CACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGG 233661 Query 212807 GAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------C 212858 | | ||||||| ||| | || || || |||||| || | ||| | Sbjct 233662 AATGTTGGGGATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTC 233713 Query 212859 ATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTAT 212917 |||| ||| ||||||||| | |||| | || ||| | || |||||||| | Sbjct 233714 ATGTTCTCTGACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGAC 233772 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || | | ||| | | ||||| ||| ||||| ||||||| || Sbjct 233773 CTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCA 233832 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 |||||| |||| ||||| | || |||||| ||||| || || || || || Sbjct 233833 CTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGA 233892 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||| | ||| ||||||| | |||| || | || | ||||||||||| | | | Sbjct 233893 GTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT 233952 Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157 ||| ||| | | | |||||||| |||| | ||| | || || Sbjct 233953 -AGGA----GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGA 234003 Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217 ||| |||| | ||| || || ||| || || |||||||| || |||| || || Sbjct 234004 GCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGC 234063 Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAA 213277 ||| | |||||||| ||||| |||| | || |||| ||||||||| || || ||| Sbjct 234064 AGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAA 234123 Query 213278 GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCT 213337 ||||| | ||| ||||||| || || | ||| || | || ||||||| Sbjct 234124 TGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCG 234183 Query 213338 GTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCT 213396 ||| | | ||| ||| | || ||| | ||||| ||||| |||||| ||| Sbjct 234184 GTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCT 234242 Query 213397 TGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGT 213456 |||| ||||| || ||| ||||||||||||| | | || | || | | || || | Sbjct 234243 TGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCT 234302 Query 213457 AGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCT 213516 | | || | || | ||||| || | ||||| ||||| || || |||| Sbjct 234303 CGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCT 234362 Query 213517 C--CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCC 213574 | ||| ||| | | ||||||||||||||| ||||||| || || ||||||||| Sbjct 234363 CATCTG-GAG-CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCC 234420 Query 213575 CAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCC 213634 || |||| || || ||| |||||| | |||||||| || ||| | || | || Sbjct 234421 AAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCC 234480 Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCT 213694 |||||| ||| | | | || || ||| | | | || || | ||| || Sbjct 234481 GGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCT 234536 Query 213695 GACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGA 213753 || || | | | | | ||| || | ||||| ||||| ||||| |||| || | | Sbjct 234537 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAA 234596 Query 213754 CCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGA 213813 | ||| || || || ||| ||||| || |||| |||| | | || Sbjct 234597 CATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGA 234656 Query 213814 CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCT 213873 | | |||||| || || || || | ||| || ||| ||||| || | | | | Sbjct 234657 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTT 234716 Query 213874 CGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCT 213933 | ||| |||| ||| ||||| || || | || | | || ||| || |||||||||| Sbjct 234717 CTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCT 234776 Query 213934 CCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCA 213990 | | |||||||||||| || || || | |||| || |||||||| || | || Sbjct 234777 CAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAG 234836 Query 213991 CCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCT 214049 |||| ||| || || | ||||| || |||||||| ||| ||||| || || | Sbjct 234837 TGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCA 234895 Query 214050 ATATACGAGCCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACT 214107 || || ||||| | |||||| | |||| |||| ||| || || || || |||| || Sbjct 234896 ATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCT 234953 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||||||| || | | | || || ||| || | ||||||||||| | | Sbjct 234954 TGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCA 235013 Query 214168 GGTTCAGCAAGAAGCAG 214184 | || |||||||||| Sbjct 235014 TGGCCACCAAGAAGCAG 235030 >seq331 Length=1764132 Score = 224 bits (248), Expect = 2e-53 Identities = 566/854 (66%), Gaps = 16/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||| |||||||| Sbjct 1498109 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 1498050 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| | Sbjct 1498049 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 1497995 Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || | |||| |||||| |||| ||||||| |||||||||| |||||| || | Sbjct 1497994 AGTAGGCGATCGGCGACGAACTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 1497935 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || || | ||| | ||| | ||||||| ||| ||| ||||| || | Sbjct 1497934 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 1497875 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || || ||| || || ||||| ||| ||| | | || | |||| Sbjct 1497874 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 1497818 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || Sbjct 1497817 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 1497758 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 | ||||| || | | || |||||||| || || || ||||| |||||||||||||| Sbjct 1497757 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 1497698 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || || |||| | |||| | | ||||||||| || ||| Sbjct 1497697 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 1497638 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||||||| |||||| | ||||||||| || | || ||||| ||| Sbjct 1497637 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 1497578 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | | | || || || | || ||| || || | || |||| Sbjct 1497577 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 1497518 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | ||||| | |||| Sbjct 1497517 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 1497458 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | | ||| | ||| | || ||||| ||||| || ||||| || || || ||| Sbjct 1497457 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 1497398 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610 || || ||||| ||| | ||| || |||| || | |||| || |||||| | Sbjct 1497397 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 1497338 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || ||| || | || || | |||||||| || || || |||||| Sbjct 1497337 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 1497278 Query 48671 TACATGCCCCATAT 48684 ||||| |||||| Sbjct 1497277 TACATTTGCCATAT 1497264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527490263040