Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq253 154 4e-32
seq424 118 3e-21
seq297 96.9 1e-14
seq435 86.0 2e-11
>seq253
Length=310610
Score = 154 bits (170), Expect = 4e-32
Identities = 558/867 (64%), Gaps = 11/867 (1%)
Strand=Plus/Plus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||||| ||||| |||||||||||||| | ||||||||| || || | |
Sbjct 234386 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGG 234445
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| |||||| | || || || ||||| |||| || || |||||
Sbjct 234446 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 234505
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
||| | | | ||| || || | ||||||| |||||| |
Sbjct 234506 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 234565
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|||||| | | || ||||||||| ||| ||| |||||||| | | ||||
Sbjct 234566 TCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGG 234625
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938
|| | ||| | |||| | || | | | ||||||| |||||| | ||| |||
Sbjct 234626 CACATCAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 234684
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
| ||| ||||| | || | || || || | || || ||||| || || ||
Sbjct 234685 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 234744
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055
| ||| | | | || | ||| ||||| || || || |||||| ||| |
Sbjct 234745 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 234804
Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
| | ||||||||||| || || || |||||||| || || |||| | |||||| || |
Sbjct 234805 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 234864
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|| ||| ||||| ||||| || || |||| ||| | || || | | | | || ||
Sbjct 234865 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 234924
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
|| ||| || |||||||| || | || || || || ||| ||| | ||||
Sbjct 234925 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 234984
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| | ||||| ||||| ||||| | ||| | | | |||| || || || |
Sbjct 234985 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 235044
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||| || ||||| |||| ||||| || | ||||| | || ||||| |||||
Sbjct 235045 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 235104
Query 156356 ATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATAGAGAC 156412
|| | ||||||||| ||| || | |||| | ||| ||||| | || || ||
Sbjct 235105 GTAGTTGTATGTCTC---AATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 235161
Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472
| ||| ||| || || || | ||| ||| | || ||||||| ||||||||||
Sbjct 235162 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 235221
Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| |||||||| || || ||||| ||
Sbjct 235222 TCGCTCCAGAGTCTTGAAGCCGAAGTA 235248
>seq424
Length=1446682
Score = 118 bits (130), Expect = 3e-21
Identities = 173/241 (72%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622
||||| | ||||||| | ||| | || ||||||||| || |||||||| | ||
Sbjct 641678 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 641737
Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682
|| ||||| |||||||| ||||| ||||||||||||| || |||||||| | |||||
Sbjct 641738 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 641797
Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740
||| || |||| | | | | ||| |||| |||||||| | | | ||||| | ||
Sbjct 641798 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 641855
Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800
|| ||||| ||| || |||||| | || || ||||| | |||| |||||| || |
Sbjct 641856 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 641915
Query 302801 C 302801
|
Sbjct 641916 C 641916
>seq297
Length=240750
Score = 96.9 bits (106), Expect = 1e-14
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || |||||||| |||||| || || || |||||||| ||||| ||| | ||
Sbjct 15745 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 15686
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || ||||| ||||| || | || || ||| || | |||| || ||||| ||
Sbjct 15685 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 15627
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| ||||||||||||||
Sbjct 15626 TCCGTGACGAGATGCAAACTTATCACCAAT 15597
>seq435
Length=1163839
Score = 86.0 bits (94), Expect = 2e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || ||||
Sbjct 726347 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 726288
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
||||||| ||||| | |||||| ||||||| |||||||| ||||| |||||
Sbjct 726287 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 726233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471809000905672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |