Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq331 134 2e-25 seq22 134 2e-25 seq253 98.7 1e-14 seq33 98.7 1e-14 seq66 86.0 8e-11 >seq331 Length=1764132 Score = 134 bits (148), Expect = 2e-25 Identities = 313/472 (66%), Gaps = 0/472 (0%) Strand=Plus/Plus Query 1573777 TCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCACG 1573836 |||| || | |||||||| ||||| | | ||||||||||| ||||||||| | Sbjct 1701855 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 1701914 Query 1573837 CCGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCAACCTCTTGCTGGCGG 1573896 || ||| |||| | | || |||||| ||||||| || | | | | | Sbjct 1701915 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCCG 1701974 Query 1573897 GTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCG 1573956 | |||||| | ||||| ||||| || || || ||||| ||||| |||| Sbjct 1701975 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 1702034 Query 1573957 CGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCG 1574016 | ||| | | || ||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct 1702035 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCG 1702094 Query 1574017 TGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACA 1574076 | || || |||||| | ||| || | | || || || |||| || || | Sbjct 1702095 TACGAAACCGAATCAAGGGCTTCGCGCAGAAAAAGGTCACACTCCCCGCCGGGCGGCAGA 1702154 Query 1574077 AGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGT 1574136 || | | || || || || || || || | || || | || |||||||| ||||| Sbjct 1702155 AGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCGCC 1702214 Query 1574137 CCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGA 1574196 || ||||||| ||| || |||||| ||||| ||| | || |||||| ||| | Sbjct 1702215 GAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGAACA 1702274 Query 1574197 TGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCT 1574248 |||||||| | || ||| |||||||| || | |||| || ||| || Sbjct 1702275 AAATCATCGAGCCTCTTCAATCGCGCTGCGCAATCTTACGCTATGCGCGACT 1702326 Score = 125 bits (138), Expect = 9e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||||||||| || ||| |||||| |||||||||||||| | ||||| || Sbjct 1498114 GCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATG 1498055 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||||| ||| | | ||||| | | Sbjct 1498054 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAC 1497995 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||||| |||||||| ||||| ||||| || |||||||||| |||||||| || | Sbjct 1497994 AGTAGGCGATCGGCGACGAACTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 1497935 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 ||| || || | || ||| ||||| | ||||||| |||||||||| |||| Sbjct 1497934 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 1497875 Query 868931 AT 868932 || Sbjct 1497874 AT 1497873 >seq22 Length=834795 Score = 134 bits (148), Expect = 2e-25 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177 ||||||| | |||||| || | ||| ||| | ||||| ||| | | || ||| Sbjct 97248 CGACATCGAGGACTGGGACCAGAAATTTATGC-AGGTCGATCAGGAGATGTTGTTCGAGA 97306 Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 | |||||||||||||||||| | || |||||| |||| ||||| | || |||||| | | Sbjct 97307 TCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGCAAGACAG 97366 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 | |||||||||||||||||||||||||| || |||||||| ||||| || ||||| || Sbjct 97367 TCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAACATTCAGA 97426 Query 1592298 ACG 1592300 ||| Sbjct 97427 ACG 97429 >seq253 Length=310610 Score = 98.7 bits (108), Expect = 1e-14 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATG 1627392 ||||||| || || ||||| | | ||| || || | ||| |||||| | ||| ||| Sbjct 233763 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 233822 Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452 | ||| | |||| | ||||| ||||||||| |||| ||| || ||||| |||| Sbjct 233823 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 233881 Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTC 1627511 ||||| ||||||||||||| ||||||| | ||| || || | | || ||| ||||||| Sbjct 233882 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTG-AGTGCGGCCCAGTC 233940 Query 1627512 CCAGCGGCCG 1627521 |||| || || Sbjct 233941 CCAGAGGTCG 233950 >seq33 Length=800093 Score = 98.7 bits (108), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| ||||| || ||||| |||||| |||||| || ||||||| || ||| Sbjct 21074 GACAGCATTGGCGGAACCGTGACATGCGTGATCCGCAACTGTCCTTCAGGCCTGGGAGAG 21133 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||||||||| | || ||| | ||||| ||||||||||| || || || || Sbjct 21134 CCTTGCTTTGACAAATTGGAAGCCACACTCGCACACGCCATGCTCAGCATACCCGCAACA 21193 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGC 19201 || || ||||| ||||| ||| || |||| ||| Sbjct 21194 AAAGGCTTCGAATTTGGCTCCGGCTTCGGCGGATGC 21229 >seq66 Length=655386 Score = 86.0 bits (94), Expect = 8e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 1726965 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 1727024 |||||| ||| |||||| || |||||| ||||| ||||| || ||||| ||||| |||| Sbjct 614790 CGTCGATGTCTGGGTCGTTGATCAGGCCTTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 614731 Query 1727025 CATAGGCGCGCATGACCACGCAAAG 1727049 |||||||||||||| | |||||| Sbjct 614730 GATAGGCGCGCATGATGATGCAAAG 614706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107101778504552