Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq331 134 2e-25
seq22 134 2e-25
seq253 98.7 1e-14
seq33 98.7 1e-14
seq66 86.0 8e-11
>seq331
Length=1764132
Score = 134 bits (148), Expect = 2e-25
Identities = 313/472 (66%), Gaps = 0/472 (0%)
Strand=Plus/Plus
Query 1573777 TCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCACG 1573836
|||| || | |||||||| ||||| | | ||||||||||| ||||||||| |
Sbjct 1701855 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 1701914
Query 1573837 CCGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCAACCTCTTGCTGGCGG 1573896
|| ||| |||| | | || |||||| ||||||| || | | | | |
Sbjct 1701915 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCCG 1701974
Query 1573897 GTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCG 1573956
| |||||| | ||||| ||||| || || || ||||| ||||| ||||
Sbjct 1701975 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 1702034
Query 1573957 CGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCG 1574016
| ||| | | || ||||| |||||||||||||| || ||||||||||| |||||||||
Sbjct 1702035 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCG 1702094
Query 1574017 TGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACA 1574076
| || || |||||| | ||| || | | || || || |||| || || |
Sbjct 1702095 TACGAAACCGAATCAAGGGCTTCGCGCAGAAAAAGGTCACACTCCCCGCCGGGCGGCAGA 1702154
Query 1574077 AGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGT 1574136
|| | | || || || || || || || | || || | || |||||||| |||||
Sbjct 1702155 AGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCGCC 1702214
Query 1574137 CCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGA 1574196
|| ||||||| ||| || |||||| ||||| ||| | || |||||| ||| |
Sbjct 1702215 GAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGAACA 1702274
Query 1574197 TGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCT 1574248
|||||||| | || ||| |||||||| || | |||| || ||| ||
Sbjct 1702275 AAATCATCGAGCCTCTTCAATCGCGCTGCGCAATCTTACGCTATGCGCGACT 1702326
Score = 125 bits (138), Expect = 9e-23
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||||||||| || ||| |||||| |||||||||||||| | ||||| ||
Sbjct 1498114 GCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATG 1498055
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||| | | ||||| | |
Sbjct 1498054 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAC 1497995
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| ||||| |||||||| ||||| ||||| || |||||||||| |||||||| || |
Sbjct 1497994 AGTAGGCGATCGGCGACGAACTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 1497935
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
||| || || | || ||| ||||| | ||||||| |||||||||| ||||
Sbjct 1497934 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 1497875
Query 868931 AT 868932
||
Sbjct 1497874 AT 1497873
>seq22
Length=834795
Score = 134 bits (148), Expect = 2e-25
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177
||||||| | |||||| || | ||| ||| | ||||| ||| | | || |||
Sbjct 97248 CGACATCGAGGACTGGGACCAGAAATTTATGC-AGGTCGATCAGGAGATGTTGTTCGAGA 97306
Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237
| |||||||||||||||||| | || |||||| |||| ||||| | || |||||| | |
Sbjct 97307 TCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGCAAGACAG 97366
Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297
| |||||||||||||||||||||||||| || |||||||| ||||| || ||||| ||
Sbjct 97367 TCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAACATTCAGA 97426
Query 1592298 ACG 1592300
|||
Sbjct 97427 ACG 97429
>seq253
Length=310610
Score = 98.7 bits (108), Expect = 1e-14
Identities = 139/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATG 1627392
||||||| || || ||||| | | ||| || || | ||| |||||| | ||| |||
Sbjct 233763 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 233822
Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 1627452
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 233823 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 233881
Query 1627453 ACGAGGAGCGAGTTGCGCAGGCCGTGCT-GTCGAACTAGCGCGCGCAGCGCGTCCCAGTC 1627511
||||| ||||||||||||| ||||||| | ||| || || | | || ||| |||||||
Sbjct 233882 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTG-AGTGCGGCCCAGTC 233940
Query 1627512 CCAGCGGCCG 1627521
|||| || ||
Sbjct 233941 CCAGAGGTCG 233950
>seq33
Length=800093
Score = 98.7 bits (108), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 1/156 (1%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|||||||| ||||| || ||||| |||||| |||||| || ||||||| || |||
Sbjct 21074 GACAGCATTGGCGGAACCGTGACATGCGTGATCCGCAACTGTCCTTCAGGCCTGGGAGAG 21133
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||||||||| | || ||| | ||||| ||||||||||| || || || ||
Sbjct 21134 CCTTGCTTTGACAAATTGGAAGCCACACTCGCACACGCCATGCTCAGCATACCCGCAACA 21193
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGC 19201
|| || ||||| ||||| ||| || |||| |||
Sbjct 21194 AAAGGCTTCGAATTTGGCTCCGGCTTCGGCGGATGC 21229
>seq66
Length=655386
Score = 86.0 bits (94), Expect = 8e-11
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 1726965 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 1727024
|||||| ||| |||||| || |||||| ||||| ||||| || ||||| ||||| ||||
Sbjct 614790 CGTCGATGTCTGGGTCGTTGATCAGGCCTTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 614731
Query 1727025 CATAGGCGCGCATGACCACGCAAAG 1727049
|||||||||||||| | ||||||
Sbjct 614730 GATAGGCGCGCATGATGATGCAAAG 614706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107101778504552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |