Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq319 156 7e-32 seq331 152 8e-31 seq22 118 2e-20 seq253 89.7 8e-12 >seq319 Length=205069 Score = 156 bits (172), Expect = 7e-32 Identities = 177/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| ||| Sbjct 89437 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 89496 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| ||||||| |||||||| ||||| | ||| || |||||| || | Sbjct 89497 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 89555 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| ||| ||| |||| ||||||||||| || ||||||| Sbjct 89556 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 89615 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| | ||||||||| || ||| ||||| ||||||||||| || Sbjct 89616 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 89670 >seq331 Length=1764132 Score = 152 bits (168), Expect = 8e-31 Identities = 324/482 (67%), Gaps = 4/482 (1%) Strand=Plus/Plus Query 2018914 TCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACG 2018973 |||| || | |||||||||||||| | ||||||||||| || |||||| | Sbjct 1701855 TCCCTAGGGTTGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAA 1701914 Query 2018974 CCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGG 2019033 || | | |||||| | ||| |||||||||||||| || | | | | | Sbjct 1701915 CCATCGAACGCCTCAAAATCATCGCCAAAGACGGCAACATGCCACACGTAATCATCTCCG 1701974 Query 2019034 GCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCG 2019093 || |||||| | ||||| ||||| || ||||| |||||| ||||| |||| Sbjct 1701975 GCATGCCCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCG 1702034 Query 2019094 CGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCG 2019153 | ||| | | || ||||| ||||||||||| || || ||||||||||| | ||||||| Sbjct 1702035 CAGCCTACAAAGAAGCCGTCCTCGAACTCAACGCCTCCGACGAGCGCGGAATCGACGTCG 1702094 Query 2019154 TGCGTAGAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCA 2019211 | || | ||||| || || ||| ||||| || || || |||| || || Sbjct 1702095 TACGAAACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCA 1702152 Query 2019212 CAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCG 2019271 ||| | | || || ||||| || || || | || || | || |||||||| || || Sbjct 1702153 GAAGATTGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCG 1702212 Query 2019272 ATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTC 2019331 || ||||||| |||| || |||||| || || || | || |||||| ||| Sbjct 1702213 CCGAACGATGGAAATCTACAGCAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGAA 1702272 Query 2019332 GATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391 | ||||||| | || || || ||||| ||||| |||| |||||| |||||||| Sbjct 1702273 CAAAATCATCGAGCCTCTTCAATCGCGCTGCGCAATCTTACGCTATGCGCGACTCACCGA 1702332 Query 2019392 CG 2019393 || Sbjct 1702333 CG 1702334 Score = 122 bits (134), Expect = 1e-21 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 1498122 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 1498063 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | |||| ||||| | |||| Sbjct 1498062 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 1498003 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || ||||| ||||||||||| |||||||| || |||||||| | ||||||| Sbjct 1498002 GTGCCAACAGTAGGCGATCGGCGACGAACTCAATGTATTGTGACATGAGGCCAGCGTTCA 1497943 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | ||| || || | || | | ||||| | ||||||| |||||||| Sbjct 1497942 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 1497883 Query 794131 CGATGATGAT 794140 || ||||||| Sbjct 1497882 CGGTGATGAT 1497873 >seq22 Length=834795 Score = 118 bits (130), Expect = 2e-20 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691 || ||| | |||||||||||||||||| | || |||||| | || ||||| | || ||| Sbjct 97300 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 97359 Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751 ||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || ||| Sbjct 97360 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 97419 Query 2035752 ATCAAGTACG 2035761 || || ||| Sbjct 97420 ATTCAGAACG 97429 >seq253 Length=310610 Score = 89.7 bits (98), Expect = 8e-12 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661 ||||||| || || ||||| | | ||| || || | ||| |||||||| ||| ||| Sbjct 233763 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 233822 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721 | ||| | |||| | ||||| ||||||||| |||| ||| || ||||| |||| Sbjct 233823 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 233881 Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 ||||| ||||||||||||| |||| || | || | || || || ||| ||||||| Sbjct 233882 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 233940 Query 2069781 CCAGCGGCCG 2069790 |||| || || Sbjct 233941 CCAGAGGTCG 233950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916197893200184