Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq331 174 2e-37
seq253 95.1 2e-13
>seq331
Length=1764132
Score = 174 bits (192), Expect = 2e-37
Identities = 357/515 (69%), Gaps = 28/515 (5%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || |
Sbjct 1497263 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 1497321
Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | ||||| ||| || | | ||||||||| || ||||
Sbjct 1497322 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 1497378
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| ||||||||||| || || |||||| ||||||||| || ||||||||| | |
Sbjct 1497379 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 1497437
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||| || | || |||||||| | || ||||| |||||||||
Sbjct 1497438 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 1497497
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || || || || || || ||||| || ||| ||| ||
Sbjct 1497498 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 1497557
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| || || || | |||| || |||||||||| | || | | | |
Sbjct 1497558 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 1497614
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| ||||||||| || ||||| ||||| | ||||||| || ||| |
Sbjct 1497615 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 1497669
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240
| ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || |||
Sbjct 1497670 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 1497728
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| ||||| || || |||||| |||| ||
Sbjct 1497729 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 1497763
Score = 131 bits (144), Expect = 2e-24
Identities = 317/480 (66%), Gaps = 0/480 (0%)
Strand=Plus/Minus
Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915
|||| ||||| ||| || |||| | ||| || || || || || | ||||||||
Sbjct 1702334 CGTCGGTGAGTCGCGCATAGCGTAAGATTGCGCAGCGCGATTGAAGAGGCTCGATGATTT 1702275
Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975
| ||| |||||| || | ||| || || ||||| || | | ||||||| ||
Sbjct 1702274 TGTTCGATTGGTTGCAAGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTTCCATCGTTC 1702215
Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035
|| || ||||| || || | | || | || || || || || || || | ||||
Sbjct 1702214 GGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCATCTAGAATTACAATCT 1702155
Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095
| || |||||| || || ||| ||||| ||| | ||||| || || |
Sbjct 1702154 TCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATTCGGTTTCGTA 1702095
Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCG 333155
||||||| | ||||||||||| || |||||||||||||| ||||| || | | ||| |
Sbjct 1702094 CGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCTTTGTAGGCTG 1702035
Query 333156 CACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGAC 333215
| || ||||| |||||| ||||| || ||||| ||||| | |||||| |
Sbjct 1702034 CGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTCCGGGCATGC 1701975
Query 333216 CCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGG 333275
| | | | | || |||||||||||||| ||| | |||||| | | ||
Sbjct 1701974 CGGAGATGATTACGTGTGGCATGTTGCCGTCTTTGGCGATGATTTTGAGGCGTTCGATGG 1701915
Query 333276 CGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGGGA 333335
| ||||||||| ||||||||||| | | |||||||||||||| | || ||||
Sbjct 1701914 TTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCAACCCTAGGGA 1701855
Score = 95.1 bits (104), Expect = 2e-13
Identities = 176/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| |||||||||| ||||||| | ||||| | | || | || || |
Sbjct 1497873 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 1497932
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | || |||||||| | ||||||| || |||||||| || |||||||| ||||
Sbjct 1497933 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAGTTC-GTCGCCGATCGCC 1497990
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || ||| |||||| | ||||| |||| | ||||||| ||| | |||
Sbjct 1497991 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 1498049
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| || ||||| | |||||||||||||| |||||| || | ||||||||||
Sbjct 1498050 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 1498109
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 1498110 AAGGCTGGTGTCA 1498122
>seq253
Length=310610
Score = 95.1 bits (104), Expect = 2e-13
Identities = 138/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930
|| || ||||||||||| |||||| || | | ||| | |||| || |||||||||
Sbjct 233950 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 233892
Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990
|| | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | ||||
Sbjct 233891 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 233832
Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| ||
Sbjct 233831 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 233773
Query 263050 GTGGTCAACC 263059
|| |||||||
Sbjct 233772 GTCGTCAACC 233763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177767217961872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |