Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq253 215 6e-51
seq424 118 1e-21
>seq253
Length=310610
Score = 215 bits (238), Expect = 6e-51
Identities = 375/532 (70%), Gaps = 10/532 (2%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| || || || ||||||| || |||| |||||||| || | ||| |
Sbjct 235095 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 235036
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
| ||||||| ||||||| |||||||||||| || || || |||||||| || |||
Sbjct 235035 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 234976
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445
||| |||||| ||||||||| | || ||||| ||| | || || || ||| |
Sbjct 234975 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 234917
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | || | ||| || || || || |||||| || | || | || || ||
Sbjct 234916 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 234857
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
||| || |||| |||||||| || || ||||| |||||||||| ||||| | |||
Sbjct 234856 GCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 234797
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || ||||||||||| ||||||||||| || ||| | ||| |||| | || || |
Sbjct 234796 TG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTCATGCAGTTCATGGACCTTC 234738
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682
| ||| || || | ||||| | || ||| || || |||| ||| ||||| |||||
Sbjct 234737 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 234680
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741
||| || ||||| ||||| || || || ||| | | | | || ||||||||||| |
Sbjct 234679 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTGATGTGCCCCA 234621
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTA 53793
|||| ||||| || || || ||| |||||||| ||||| || ||| ||||
Sbjct 234620 ACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAGGAGCTGTA 234569
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct 233898 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 233839
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | |||||| |||
Sbjct 233838 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 233803
>seq424
Length=1446682
Score = 118 bits (130), Expect = 1e-21
Identities = 185/265 (70%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || ||||| || ||||| |||||||||| || ||||| || | |
Sbjct 79240 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 79299
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | |||||||| ||| |||| | |||| ||| | || ||| |
Sbjct 79300 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGG 79359
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || || | | | || | || | ||| | |||||||||| || || |||
Sbjct 79360 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 79419
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| |||||||| ||||| | || || | ||||||||||| | || ||||| ||||
Sbjct 79420 TCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCATGTTG 79479
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416
|||| ||||| ||||| |||||||
Sbjct 79480 TTGGAACCCACGAAGTTCTGAGCCA 79504
Score = 107 bits (118), Expect = 2e-18
Identities = 281/424 (66%), Gaps = 10/424 (2%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
||||| |||||||| || |||||||||| ||| |||||||||| || || | || | |
Sbjct 79240 CCGGTTCCGATGCCATCAGCACCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 79299
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
||||| || | | ||| ||||| || | ||| ||| | | | || | |
Sbjct 79300 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 79358
Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
| || ||| | ||| ||| ||| || | |||| | ||||| || | ||||
Sbjct 79359 GTGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 79414
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
||||||| ||||||||| ||| || | |||||| | ||| |||||||||| ||| |
Sbjct 79415 CCGCATCGTTGCCACCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATGTTCA 79474
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||||| |||||||| |||||||||| | | || || |||||| | |
Sbjct 79475 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 79534
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||| | || || || | | | || | || |||| || | ||||||| | |
Sbjct 79535 CACCGTACGGGTATGCGGTGAGGCCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 79594
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
| || ||||||| || ||| | ||| || || || ||||| || ||||| |
Sbjct 79595 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 79654
Query 152291 CGTC 152294
||||
Sbjct 79655 CGTC 79658
Score = 98.7 bits (108), Expect = 1e-15
Identities = 243/360 (68%), Gaps = 14/360 (4%)
Strand=Plus/Plus
Query 152757 CACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGT 152816
||| || || | ||||| || || ||||||||||| || || || ||||| |||||
Sbjct 80124 CACTTGCAAGAAGTTGATGAGCAGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGT 80183
Query 152817 CATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTT 152875
||||||||||||| | || || |||| | | |||| | |||| |||| |||||
Sbjct 80184 CATGATCATCAGATGGCCATAACGCAAG-CCTTTAGTATCTGTGTAGTCCTTCTTATGTT 80242
Query 152876 GAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCG 152935
| || || | | ||| |||| ||| || || | || | | | ||| | | |
Sbjct 80243 GCAGACCCAAAAACTTCTTGATGTTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGG 80302
Query 152936 TGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGC 152995
||||| || |||||| | ||| ||||| ||||| || || || ||| || ||
Sbjct 80303 AAGCATCGCGCACATTGAGAATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGT 80362
Query 152996 CTACAAC-GCTCAGACCGGCAATAGCAAG---GGCTTTCGCCGAGTCACCCTCGGTGATA 153051
||||| |||| | || |||| |||||| ||| || |||||||| || || |
Sbjct 80363 TGACAACAGCTC-GCCCTGCAAGAGCAAGCAAGGC---GGCAGAGTCACCTTCTGTCAAG 80418
Query 153052 ATAAGCGTACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
|| ||||| || | || ||||| | ||||||||| ||||||||| ||||||||
Sbjct 80419 ATGAGCGTGCA--CTTGTGACCGTCCTTCGTACCGGCCTTGTTGGCGTCTGTAAGCTTGG 80476
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132
|||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 81285 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 81343
Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||||||||| || | |||||| || ||||| | |||||| ||
Sbjct 81344 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 81398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212880868800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |