Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_028926.1
Length=40000
Score E
Sequences producing significant alignments: (Bits) Value
seq418 230 6e-56
>seq418
Length=37979
Score = 230 bits (254), Expect = 6e-56
Identities = 562/842 (67%), Gaps = 16/842 (2%)
Strand=Plus/Plus
Query 5587 ATGGCTACAAACGTACAAGGTTATAACGCCACTTCCGGCGTAAACGCGTTAACAGCAGAA 5646
||||| || ||||| ||||| ||||||||||| || || || ||||| | || | ||
Sbjct 6841 ATGGCAACGAACGTTCAAGGCTATAACGCCACGTCGGGGGTTAACGCTCTGACCCCGGAG 6900
Query 5647 CAAGCAGA-GTTTTACAACCGTACAATGCTTGAAAGATTAACACCGGAATTATTTTTCCT 5705
|| ||| | || |||| | | ||||| || | | || ||||| | | |
Sbjct 6901 CA-GCACACGTATTACCAGGACGCCATGCTGGAGCGCCTGACGCCGGAGCTCCAGTACGC 6959
Query 5706 TAACTACGGTGAAAAGAAAAACATTCCTAAAAACAGCGGTGCAACAACTTCTTTCCGCCG 5765
|| | ||| || ||||| ||||| || || |||| || || || || ||||||||
Sbjct 6960 CAAGTTCGGGGAGAAGAAGAACATCCCCAAGAACAAGGGCGCCACGACGCAGTTCCGCCG 7019
Query 5766 TTTAAACTCTTTAGCGGTTTCAACTACTGCTCTTACTGAAGGTGTAACACCTGACGGAGT 5825
| ||||| | || || || || || || ||||| ||||| || || |||||||| ||
Sbjct 7020 GCTCAACTCGCTCGCCGTCTCCACGACGGCCCTTACGGAAGGCGTCACGCCTGACGGCGT 7079
Query 5826 AGACTTGAACATCACTAAAATTATCGCTACTGTTCAACAATACGGTAACTGGACTAAAAT 5885
|| |||||||||| | || | || || ||||| | ||||| |||||||| |
Sbjct 7080 GGATCTGAACATCACCCAGATCACGGCCACGGTTCAGGAGTACGGAGCATGGACTAAGCT 7139
Query 5886 TTCTGAGTTCATTAACCTTACA--GGGTTA-GACCCGCTATTAACTGAAACAGCGGAATT 5942
|| | ||||| ||| || ||| || |||||| | | || || || |||| |
Sbjct 7140 GTCCAACTTCAT---CCTCACGACGGGCTATGACCCGATGATGACGGAGACGTCGGAGCT 7196
Query 5943 AATGGGCGAAAACGCAGGCGAATCTATTGATACAATTTGCCGCGACATGATCTATGCAGG 6002
||||||||||| || ||||| || || || || || | ||| ||| | | || ||
Sbjct 7197 GATGGGCGAAAATGCCGGCGAGTCCATCGACACCATCTACCGGGACGTCCTGGCGGCCGG 7256
Query 6003 AACTAACGTACAATACGCTGGCGGTAAAACTGCGCGTAACTTACTTACTGCTGCAGACAA 6062
|| ||||| ||||| ||| || | || || ||| || || | |||||
Sbjct 7257 AAGCAACGTCGTTTACGCAAACGGCAAGTCCGCTCGCAACACGCTGCTCGCCACCGACAA 7316
Query 6063 AATCACAGCATTAGATATTCTTAAAGCTCGCCGTACTTTAAAACGTAACAAGGTTAAACA 6122
|||| | || | || || || | ||||| || | || || |||||||| || |
Sbjct 7317 AATCTCGGCCATGGACATCCTCCGCGTCCGCCGGACGATGAAGCGCAACAAGGTCAAGAA 7376
Query 6123 AATTAGTTTACCAGGCGGCGGCAAAGGTTACTTAGCTTTCATTCATACAGACGTTGCAAC 6182
| | | | ||| ||||||||| || | | || |||||||| || ||||| || ||
Sbjct 7377 AGTGAAGCTGCCAAGCGGCGGCATGGGCTGGCTCGCCTTCATTCACACGGACGTCGCCAC 7436
Query 6183 AGATTTAATGCAAACGCAAGAATGGAAAGACCAAAATACTTACGTTGATACTAAAAACCG 6242
||||| ||| ||||| |||||||| ||||| || || |||||| | || ||||||||
Sbjct 7437 GGATTTGATGACGACGCAGGAATGGAAGGACCAGAACACGTACGTTAACACGAAAAACCG 7496
Query 6243 TCAAGAAGGTATTTTAGGTAAAATGTACGGCATCTATTTCTTAGAAGCTGACAACGCTAT 6302
| || || || | || |||||||||| ||||| ||| | || | || |||| |
Sbjct 7497 CGAGGAGGGCATCCTCGGCCAAATGTACGGGATCTACTTCATCGAGGTAGATAACGGCGT 7556
Query 6303 GAAATGGGCGGGCGCTGG-TGCTTCATCTGCTGACGTATTCGGCACGCTATTTATTGGTA 6361
|| | ||||| || || | | | | || || || ||||| ||||| || | || |
Sbjct 7557 CAAGTTCGCGGGGGCGGGCTCCGGCGGC-GCGGATGTCTTCGGAACGCTGTTCGTCGGCA 7615
Query 6362 AGGGCGCTTATGGTGTACCTGACGTAGCGGG---CAGCTCTAAGCCTGAAATGATTGTAC 6418
||| ||||||| || ||| || | | ||| |||| |||||||| || || || |
Sbjct 7616 AGGCAGCTTATGCTGGACCGGATATCGAGGGTTCCAGC---AAGCCTGACATCATCGTTC 7672
Query 6419 AC 6420
||
Sbjct 7673 AC 7674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127877707538464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |