Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_028926.1 Length=40000 Score E Sequences producing significant alignments: (Bits) Value seq418 230 6e-56 >seq418 Length=37979 Score = 230 bits (254), Expect = 6e-56 Identities = 562/842 (67%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 5587 ATGGCTACAAACGTACAAGGTTATAACGCCACTTCCGGCGTAAACGCGTTAACAGCAGAA 5646 ||||| || ||||| ||||| ||||||||||| || || || ||||| | || | || Sbjct 6841 ATGGCAACGAACGTTCAAGGCTATAACGCCACGTCGGGGGTTAACGCTCTGACCCCGGAG 6900 Query 5647 CAAGCAGA-GTTTTACAACCGTACAATGCTTGAAAGATTAACACCGGAATTATTTTTCCT 5705 || ||| | || |||| | | ||||| || | | || ||||| | | | Sbjct 6901 CA-GCACACGTATTACCAGGACGCCATGCTGGAGCGCCTGACGCCGGAGCTCCAGTACGC 6959 Query 5706 TAACTACGGTGAAAAGAAAAACATTCCTAAAAACAGCGGTGCAACAACTTCTTTCCGCCG 5765 || | ||| || ||||| ||||| || || |||| || || || || |||||||| Sbjct 6960 CAAGTTCGGGGAGAAGAAGAACATCCCCAAGAACAAGGGCGCCACGACGCAGTTCCGCCG 7019 Query 5766 TTTAAACTCTTTAGCGGTTTCAACTACTGCTCTTACTGAAGGTGTAACACCTGACGGAGT 5825 | ||||| | || || || || || || ||||| ||||| || || |||||||| || Sbjct 7020 GCTCAACTCGCTCGCCGTCTCCACGACGGCCCTTACGGAAGGCGTCACGCCTGACGGCGT 7079 Query 5826 AGACTTGAACATCACTAAAATTATCGCTACTGTTCAACAATACGGTAACTGGACTAAAAT 5885 || |||||||||| | || | || || ||||| | ||||| |||||||| | Sbjct 7080 GGATCTGAACATCACCCAGATCACGGCCACGGTTCAGGAGTACGGAGCATGGACTAAGCT 7139 Query 5886 TTCTGAGTTCATTAACCTTACA--GGGTTA-GACCCGCTATTAACTGAAACAGCGGAATT 5942 || | ||||| ||| || ||| || |||||| | | || || || |||| | Sbjct 7140 GTCCAACTTCAT---CCTCACGACGGGCTATGACCCGATGATGACGGAGACGTCGGAGCT 7196 Query 5943 AATGGGCGAAAACGCAGGCGAATCTATTGATACAATTTGCCGCGACATGATCTATGCAGG 6002 ||||||||||| || ||||| || || || || || | ||| ||| | | || || Sbjct 7197 GATGGGCGAAAATGCCGGCGAGTCCATCGACACCATCTACCGGGACGTCCTGGCGGCCGG 7256 Query 6003 AACTAACGTACAATACGCTGGCGGTAAAACTGCGCGTAACTTACTTACTGCTGCAGACAA 6062 || ||||| ||||| ||| || | || || ||| || || | ||||| Sbjct 7257 AAGCAACGTCGTTTACGCAAACGGCAAGTCCGCTCGCAACACGCTGCTCGCCACCGACAA 7316 Query 6063 AATCACAGCATTAGATATTCTTAAAGCTCGCCGTACTTTAAAACGTAACAAGGTTAAACA 6122 |||| | || | || || || | ||||| || | || || |||||||| || | Sbjct 7317 AATCTCGGCCATGGACATCCTCCGCGTCCGCCGGACGATGAAGCGCAACAAGGTCAAGAA 7376 Query 6123 AATTAGTTTACCAGGCGGCGGCAAAGGTTACTTAGCTTTCATTCATACAGACGTTGCAAC 6182 | | | | ||| ||||||||| || | | || |||||||| || ||||| || || Sbjct 7377 AGTGAAGCTGCCAAGCGGCGGCATGGGCTGGCTCGCCTTCATTCACACGGACGTCGCCAC 7436 Query 6183 AGATTTAATGCAAACGCAAGAATGGAAAGACCAAAATACTTACGTTGATACTAAAAACCG 6242 ||||| ||| ||||| |||||||| ||||| || || |||||| | || |||||||| Sbjct 7437 GGATTTGATGACGACGCAGGAATGGAAGGACCAGAACACGTACGTTAACACGAAAAACCG 7496 Query 6243 TCAAGAAGGTATTTTAGGTAAAATGTACGGCATCTATTTCTTAGAAGCTGACAACGCTAT 6302 | || || || | || |||||||||| ||||| ||| | || | || |||| | Sbjct 7497 CGAGGAGGGCATCCTCGGCCAAATGTACGGGATCTACTTCATCGAGGTAGATAACGGCGT 7556 Query 6303 GAAATGGGCGGGCGCTGG-TGCTTCATCTGCTGACGTATTCGGCACGCTATTTATTGGTA 6361 || | ||||| || || | | | | || || || ||||| ||||| || | || | Sbjct 7557 CAAGTTCGCGGGGGCGGGCTCCGGCGGC-GCGGATGTCTTCGGAACGCTGTTCGTCGGCA 7615 Query 6362 AGGGCGCTTATGGTGTACCTGACGTAGCGGG---CAGCTCTAAGCCTGAAATGATTGTAC 6418 ||| ||||||| || ||| || | | ||| |||| |||||||| || || || | Sbjct 7616 AGGCAGCTTATGCTGGACCGGATATCGAGGGTTCCAGC---AAGCCTGACATCATCGTTC 7672 Query 6419 AC 6420 || Sbjct 7673 AC 7674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127877707538464