Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_029069.1 Length=165031 Score E Sequences producing significant alignments: (Bits) Value seq418 203 3e-47 >seq418 Length=37979 Score = 203 bits (224), Expect = 3e-47 Identities = 629/968 (65%), Gaps = 4/968 (0%) Strand=Plus/Plus Query 6575 ATGGCTACAAACGTACAAGGCTATAATGCCACGGCTGGCGTAAACGCATTAACAGCAGAA 6634 ||||| || ||||| ||||||||||| |||||| | || || ||||| | || | || Sbjct 6841 ATGGCAACGAACGTTCAAGGCTATAACGCCACGTCGGGGGTTAACGCTCTGACCCCGGAG 6900 Query 6635 CAAGCGGA-GTTTTACAACCGTACTATGCTTGAAAGATTAACACCTGAATTATTTTTCCT 6693 || || | || |||| | | ||||| || | | || || || | | | Sbjct 6901 CA-GCACACGTATTACCAGGACGCCATGCTGGAGCGCCTGACGCCGGAGCTCCAGTACGC 6959 Query 6694 TAACTATGGGGAGAAGAAGAACATTCCTAAGAATAGTGGGGCAACAACTTCCTTCCGCCG 6753 || | ||||||||||||||||| || ||||| | || || || || |||||||| Sbjct 6960 CAAGTTCGGGGAGAAGAAGAACATCCCCAAGAACAAGGGCGCCACGACGCAGTTCCGCCG 7019 Query 6754 TCTTAACTCTTTAGCGGTTTCAACTACTGCGTTAACTGAAGGCGTAACACCTGACGGAGT 6813 || ||||| | || || || || || || | || |||||||| || |||||||| || Sbjct 7020 GCTCAACTCGCTCGCCGTCTCCACGACGGCCCTTACGGAAGGCGTCACGCCTGACGGCGT 7079 Query 6814 AGACCTGAACATTACAAAAATCCTTGCTACTGTTCAACAATACGGTAACTGGACGAAAAT 6873 || |||||||| || | ||| || || ||||| | ||||| ||||| || | Sbjct 7080 GGATCTGAACATCACCCAGATCACGGCCACGGTTCAGGAGTACGGAGCATGGACTAAGCT 7139 Query 6874 TTCAGAGTTTTTAAACCTTACAGGATTGGACCCAATGTTAACTGAAACAGCTCAATTAAT 6933 || | || | | || || | ||||| ||| | || || || | | | || Sbjct 7140 GTCCAACTTCATCCTCACGACGGGCTATGACCCGATGATGACGGAGACGTCGGAGCTGAT 7199 Query 6934 GGGTGAAAATGCTGGTGAATCTATTGATACAATCGCGCGTGACATGATCCACGCAGGAAC 6993 ||| |||||||| || || || || || || ||| || ||| | | || |||| Sbjct 7200 GGGCGAAAATGCCGGCGAGTCCATCGACACCATCTACCGGGACGTCCTGGCGGCCGGAAG 7259 Query 6994 AAACGTTCAATATGCAAACGGCAAAGCTACACGTAACACAATTGCGGCTGCTGATAAAAT 7053 ||||| || ||||||||||| | | || ||||| | || | || ||||| Sbjct 7260 CAACGTCGTTTACGCAAACGGCAAGTCCGCTCGCAACACGCTGCTCGCCACCGACAAAAT 7319 Query 7054 CGCGGCTTTAGATATTCTAAAAGCTCGCCGTACTTTAAAGCGTAACAAAGTAAAACCTAT 7113 | |||| | || || || | ||||| || | ||||| ||||| || || | Sbjct 7320 CTCGGCCATGGACATCCTCCGCGTCCGCCGGACGATGAAGCGCAACAAGGTCAAGAAAGT 7379 Query 7114 CTCTTTACCAGGTGGCGGCAAAGGGTATCTTGCTTTCATCCACACAGATGTAGCAACAGA 7173 | ||| | ||||||| || | || || ||||| ||||| || || || || || Sbjct 7380 GAAGCTGCCAAGCGGCGGCATGGGCTGGCTCGCCTTCATTCACACGGACGTCGCCACGGA 7439 Query 7174 CCTAATGCAAACGCAGGAATGGAAAGACCAAAATACTTACGTGGACACTAAAAACCGTGT 7233 | ||| |||||||||||||| ||||| || || ||||| |||| |||||||| | Sbjct 7440 TTTGATGACGACGCAGGAATGGAAGGACCAGAACACGTACGTTAACACGAAAAACCGCGA 7499 Query 7234 AGAGGGTACACTAGGCAAAATGTACGGCATCTATTTCTTAGAAGCTGACAACGCTATGAA 7293 ||||| | || ||| |||||||||| ||||| ||| | || | || |||| | || Sbjct 7500 GGAGGGCATCCTCGGCCAAATGTACGGGATCTACTTCATCGAGGTAGATAACGGCGTCAA 7559 Query 7294 ATATGCCGGTGCTGGTGCTTCCGGTGCTGACGTATTCGCTACATTATTCATTGGTAAAGG 7353 | || || || || | ||| || || || |||| || | ||| | || || | Sbjct 7560 GTTCGCGGGGGCGGGCTCCGGCGGCGCGGATGTCTTCGGAACGCTGTTCGTCGGCAAGGC 7619 Query 7354 CGCTTACGGTGTACCTGACATTCAAGGTTCTTCTAAGCCTGAAATGATCGTACACAAAGC 7413 ||||| | || ||| || || | ||||| |||||||| || ||||| ||| || Sbjct 7620 AGCTTATGCTGGACCGGATATCGAGGGTTCCAGCAAGCCTGACATCATCGTTCACCCTGC 7679 Query 7414 AGGAAGCGGCGGTACTAACGATCCGTTAAACATGTTCTCTACTGTAGCATGGAAATGCGC 7473 || | || || ||||| | ||| |||| | || |||||||| ||||| Sbjct 7680 CGGCTCCTCGGGCACAGCGGATCCTCTCAACCAGTTCGCGACCTGCGCATGGAAGTGCGC 7739 Query 7474 GTTTACTGTTGCTCGTTTACAAGAACT-TGCAATGGTTCGTTTAGAAAGTGGCGCAACTG 7532 || || |||| | | | || || ||| || ||||| | || |||||||| | Sbjct 7740 TTTCACGGTTGTGAGGCTGAATGAGCTCTGC-ATCGTTCGGTACGAGTCCGGCGCAACCG 7798 Query 7533 TTTAATAT 7540 | |||||| Sbjct 7799 TCTAATAT 7806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527968190564160