Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_029069.1
Length=165031
Score E
Sequences producing significant alignments: (Bits) Value
seq418 203 3e-47
>seq418
Length=37979
Score = 203 bits (224), Expect = 3e-47
Identities = 629/968 (65%), Gaps = 4/968 (0%)
Strand=Plus/Plus
Query 6575 ATGGCTACAAACGTACAAGGCTATAATGCCACGGCTGGCGTAAACGCATTAACAGCAGAA 6634
||||| || ||||| ||||||||||| |||||| | || || ||||| | || | ||
Sbjct 6841 ATGGCAACGAACGTTCAAGGCTATAACGCCACGTCGGGGGTTAACGCTCTGACCCCGGAG 6900
Query 6635 CAAGCGGA-GTTTTACAACCGTACTATGCTTGAAAGATTAACACCTGAATTATTTTTCCT 6693
|| || | || |||| | | ||||| || | | || || || | | |
Sbjct 6901 CA-GCACACGTATTACCAGGACGCCATGCTGGAGCGCCTGACGCCGGAGCTCCAGTACGC 6959
Query 6694 TAACTATGGGGAGAAGAAGAACATTCCTAAGAATAGTGGGGCAACAACTTCCTTCCGCCG 6753
|| | ||||||||||||||||| || ||||| | || || || || ||||||||
Sbjct 6960 CAAGTTCGGGGAGAAGAAGAACATCCCCAAGAACAAGGGCGCCACGACGCAGTTCCGCCG 7019
Query 6754 TCTTAACTCTTTAGCGGTTTCAACTACTGCGTTAACTGAAGGCGTAACACCTGACGGAGT 6813
|| ||||| | || || || || || || | || |||||||| || |||||||| ||
Sbjct 7020 GCTCAACTCGCTCGCCGTCTCCACGACGGCCCTTACGGAAGGCGTCACGCCTGACGGCGT 7079
Query 6814 AGACCTGAACATTACAAAAATCCTTGCTACTGTTCAACAATACGGTAACTGGACGAAAAT 6873
|| |||||||| || | ||| || || ||||| | ||||| ||||| || |
Sbjct 7080 GGATCTGAACATCACCCAGATCACGGCCACGGTTCAGGAGTACGGAGCATGGACTAAGCT 7139
Query 6874 TTCAGAGTTTTTAAACCTTACAGGATTGGACCCAATGTTAACTGAAACAGCTCAATTAAT 6933
|| | || | | || || | ||||| ||| | || || || | | | ||
Sbjct 7140 GTCCAACTTCATCCTCACGACGGGCTATGACCCGATGATGACGGAGACGTCGGAGCTGAT 7199
Query 6934 GGGTGAAAATGCTGGTGAATCTATTGATACAATCGCGCGTGACATGATCCACGCAGGAAC 6993
||| |||||||| || || || || || || ||| || ||| | | || ||||
Sbjct 7200 GGGCGAAAATGCCGGCGAGTCCATCGACACCATCTACCGGGACGTCCTGGCGGCCGGAAG 7259
Query 6994 AAACGTTCAATATGCAAACGGCAAAGCTACACGTAACACAATTGCGGCTGCTGATAAAAT 7053
||||| || ||||||||||| | | || ||||| | || | || |||||
Sbjct 7260 CAACGTCGTTTACGCAAACGGCAAGTCCGCTCGCAACACGCTGCTCGCCACCGACAAAAT 7319
Query 7054 CGCGGCTTTAGATATTCTAAAAGCTCGCCGTACTTTAAAGCGTAACAAAGTAAAACCTAT 7113
| |||| | || || || | ||||| || | ||||| ||||| || || |
Sbjct 7320 CTCGGCCATGGACATCCTCCGCGTCCGCCGGACGATGAAGCGCAACAAGGTCAAGAAAGT 7379
Query 7114 CTCTTTACCAGGTGGCGGCAAAGGGTATCTTGCTTTCATCCACACAGATGTAGCAACAGA 7173
| ||| | ||||||| || | || || ||||| ||||| || || || || ||
Sbjct 7380 GAAGCTGCCAAGCGGCGGCATGGGCTGGCTCGCCTTCATTCACACGGACGTCGCCACGGA 7439
Query 7174 CCTAATGCAAACGCAGGAATGGAAAGACCAAAATACTTACGTGGACACTAAAAACCGTGT 7233
| ||| |||||||||||||| ||||| || || ||||| |||| |||||||| |
Sbjct 7440 TTTGATGACGACGCAGGAATGGAAGGACCAGAACACGTACGTTAACACGAAAAACCGCGA 7499
Query 7234 AGAGGGTACACTAGGCAAAATGTACGGCATCTATTTCTTAGAAGCTGACAACGCTATGAA 7293
||||| | || ||| |||||||||| ||||| ||| | || | || |||| | ||
Sbjct 7500 GGAGGGCATCCTCGGCCAAATGTACGGGATCTACTTCATCGAGGTAGATAACGGCGTCAA 7559
Query 7294 ATATGCCGGTGCTGGTGCTTCCGGTGCTGACGTATTCGCTACATTATTCATTGGTAAAGG 7353
| || || || || | ||| || || || |||| || | ||| | || || |
Sbjct 7560 GTTCGCGGGGGCGGGCTCCGGCGGCGCGGATGTCTTCGGAACGCTGTTCGTCGGCAAGGC 7619
Query 7354 CGCTTACGGTGTACCTGACATTCAAGGTTCTTCTAAGCCTGAAATGATCGTACACAAAGC 7413
||||| | || ||| || || | ||||| |||||||| || ||||| ||| ||
Sbjct 7620 AGCTTATGCTGGACCGGATATCGAGGGTTCCAGCAAGCCTGACATCATCGTTCACCCTGC 7679
Query 7414 AGGAAGCGGCGGTACTAACGATCCGTTAAACATGTTCTCTACTGTAGCATGGAAATGCGC 7473
|| | || || ||||| | ||| |||| | || |||||||| |||||
Sbjct 7680 CGGCTCCTCGGGCACAGCGGATCCTCTCAACCAGTTCGCGACCTGCGCATGGAAGTGCGC 7739
Query 7474 GTTTACTGTTGCTCGTTTACAAGAACT-TGCAATGGTTCGTTTAGAAAGTGGCGCAACTG 7532
|| || |||| | | | || || ||| || ||||| | || |||||||| |
Sbjct 7740 TTTCACGGTTGTGAGGCTGAATGAGCTCTGC-ATCGTTCGGTACGAGTCCGGCGCAACCG 7798
Query 7533 TTTAATAT 7540
| ||||||
Sbjct 7799 TCTAATAT 7806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 527968190564160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |