Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq220 96.9 2e-15
>seq220
Length=1802977
Score = 96.9 bits (106), Expect = 2e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || || ||||| || || || ||||| |||||||| || || |
Sbjct 1399377 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 1399318
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || ||| || ||||| || || | || || || ||
Sbjct 1399317 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 1399258
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788
|||||| | || || |||||||| || || || |||| || |||||| || ||||||
Sbjct 1399257 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGG--ATTACA 1399200
Query 23789 ACATACAAAAAGAGTCCAC 23807
|||| || || ||||||||
Sbjct 1399199 ACATCCAGAAGGAGTCCAC 1399181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007721511648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |