Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07- 28] 456 sequences; 30,119,330 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq331 154 2e-32 seq253 147 3e-30 >seq331 Length=1764132 Score = 154 bits (170), Expect = 2e-32 Identities = 346/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || |||||||| |||| ||| || |||||||| || ||||| || || || || Sbjct 1497778 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 1497719 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||||||||| ||||| || || || ||||| |||||||| | || | || | Sbjct 1497718 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 1497659 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | | |||| ||||| || ||||| ||||||||| | | || || Sbjct 1497658 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 1497599 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAA-GtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || | || || ||||| || || | ||| | | ||| || | | ||| ||||| Sbjct 1497598 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGC-TCGCTGATGTATGTATC 1497540 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || | ||| ||| | |||||||| || || || || ||||| || ||||| || Sbjct 1497539 GATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA 1497480 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 |||| || || | |||||| ||||| | | || || || | | ||||| || || Sbjct 1497479 GCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGAC 1497420 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || ||||| || || || ||||| | || ||| || || || ||||| | Sbjct 1497419 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 1497360 Query 48599 AGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | ||| || |||||||| | || ||| || || | ||| | || ||||||||||| Sbjct 1497359 GTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 1497300 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| || ||||| ||||| | |||||| Sbjct 1497299 GAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 1497264 >seq253 Length=310610 Score = 147 bits (162), Expect = 3e-30 Identities = 528/815 (65%), Gaps = 18/815 (2%) Strand=Plus/Plus Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || ||||| || || | |||| | ||||| ||||| ||||| | || |||||||| Sbjct 234383 ATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTG 234442 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| | |||||| || ||||| || || || ||||| || |||| | |||| | Sbjct 234443 CGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGA 234502 Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTA-TCGCCTCTCTCTTTCAT 77907 |||| | ||| | ||| ||| | | | | | |||| ||||| |||| Sbjct 234503 ATAGCATACCATATTT-TCTGAGCACGAACCGTCTCACGGCCCTTGCCT-TCTCTCTCAT 234560 Query 77908 ATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCAT 77967 | | || ||| | || || || || ||||||| || ||||||||||| | Sbjct 234561 AACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGT 234620 Query 77968 TTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTA 78027 | |||||||||| | ||| || | | | || || | |||||||||||| || | Sbjct 234621 TGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAA 234680 Query 78028 TCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAA 78087 |||| ||||| || | ||| || | | | |||||| ||||| ||||| || Sbjct 234681 TCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAA 234740 Query 78088 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAG 78147 | || | |||| ||| | || | |||||| || || || || || || | | | || | Sbjct 234741 GGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTG 234800 Query 78148 GTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTG 78207 | || || || || ||||| || | || | || ||||| ||||| |||| | ||||| Sbjct 234801 GACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTG 234860 Query 78208 GAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 | | || |||||| ||||| || ||||| || ||| || || | || | || | Sbjct 234861 GTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGT 234920 Query 78268 TACTA--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | | ||| | | || || || || || |||| || || | || || || | Sbjct 234921 TGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 234978 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATG----TTAAGAAGAAAACAGCTAG 78381 |||||||||||||| || || ||||||||| ||||| |||||| | ||||| Sbjct 234979 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 235038 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 || || || || ||| | || | ||| || || ||||| || || | | Sbjct 235039 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 235094 Query 78442 TTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 | || | |||| |||||||| ||||| |||| ||| ||||| |||||| || Sbjct 235095 TCAACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCG 235153 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || |||||||| | ||| || || ||||| || Sbjct 235154 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTC 235188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664840387840