Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236775.1_202017-07-
28] 456 sequences; 30,119,330 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq220 105 2e-17
>seq220
Length=1802977
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || |||||||||||||| | | || | || || || |
Sbjct 1399171 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAA 1399229
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||||||||||| | ||| || ||||| ||||| |
Sbjct 1399230 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 1399289
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| ||||| | || | |||| || || ||||| || || || || ||||
Sbjct 1399290 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGC 1399349
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| ||||| | |||||
Sbjct 1399350 CGGTGAGTGTCTTGACGAAAATTTGCAT 1399377
Score = 104 bits (114), Expect = 5e-17
Identities = 151/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| || ||||| ||||||||||| |||| | ||| | ||||| || |
Sbjct 1399399 CAAG-TGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGA 1399457
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || || | ||||||||| | | ||| || ||||| || || |
Sbjct 1399458 GCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 1399517
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
| || |||||| | || | | ||| ||| | ||| || || || || || || ||
Sbjct 1399518 TCTTCGACTTGACATTGTCGATGGTGTCGCTGGA--CTCGACCTCGAGGGTGATGGTCTT 1399575
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||||||||| ||||||| ||||||
Sbjct 1399576 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 1399605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814058801976
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |