Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq260 113 4e-20
>seq260
Length=339642
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| |||||||||||| || ||||| || |||| || || || |||||
Sbjct 135401 AGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCC 135460
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| ||||| || | || || | |||||||||| || | ||| ||||||||
Sbjct 135461 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCT 135520
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||||| || || | | ||| || || | ||| ||| | || || |||
Sbjct 135521 TGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTC 135580
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | || ||||| || ||||||||
Sbjct 135581 TTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 135612
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| || | ||| || || || || ||||| ||||| | ||| || | | |||
Sbjct 135629 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 135688
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| ||||| ||| |||| || | ||||||||| || | || ||||||||
Sbjct 135689 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 135748
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | ||| || || | || ||| || | ||| ||||||
Sbjct 135749 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 135808
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | || ||||| || || |||||
Sbjct 135809 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 135840
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | |||| |||||| || ||||| ||||| | |
Sbjct 135842 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 135901
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||| ||||| ||||| || |||| | | |||||||| ||
Sbjct 135902 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 135961
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||| || |||||| ||||| | ||| || || | |||
Sbjct 135962 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACC 136021
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||||||||||||||||||
Sbjct 136022 TCGAGGGTAATGGTCTTGCCGGT 136044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422219619929756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |