Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_001884.1
Length=134416
Score E
Sequences producing significant alignments: (Bits) Value
seq6679 100 2e-16
seq6132 84.2 2e-11
>seq6679
Length=1512
Score = 100 bits (110), Expect = 2e-16
Identities = 196/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964
||||||| |||||||| | || ||| || |||| || |||||| ||||| |
Sbjct 429 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 370
Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024
|||||||| || || | ||||||||| ||| | ||| | ||| | ||||||||||
Sbjct 369 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 310
Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084
||| | || ||||||| ||| || || | || | || ||||||||||||||
Sbjct 309 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 250
Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144
|||| | ||| |||| || || ||| || | |||||| || |||
Sbjct 249 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 190
Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194
||| ||||| | ||||| ||||||| ||| || |||||||| || ||
Sbjct 189 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 140
>seq6132
Length=435
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/157 (74%), Gaps = 4/157 (3%)
Strand=Plus/Plus
Query 94500 TTTCCATTCATAAAAACTGTCAGC-CGGTATGATACAACGTTTGCTTACGAGC-GGCTTT 94557
||||||||||||||| | ||| || || |||||||| ||| || | ||| ||
Sbjct 90 TTTCCATTCATAAAATC-CCGAGCATGGGATAATACAACGCTTGGAACTGATCAGGCGTT 148
Query 94558 CGAAAGCTGGGTTTCTCGGACAATGTTTCAGCACGGGCATTAATCATTTTATAGCCGATC 94617
|| ||| |||||||| | | |||||| |||||||| |||||||| |||| ||| ||
Sbjct 149 TAAAGGCT-GGTTTCTCTGTGAGTGTTTCTGCACGGGCGTTAATCATCTTATTGCCTATT 207
Query 94618 TTTTCGTCTTTAGCCCATGGAGGGATAAGACCCCATC 94654
||||| || || ||||| ||| | ||||||||||
Sbjct 208 TTTTCATCCTTGGCCCAATTAGGAACTAGACCCCATC 244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429966093753227
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |