Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq6679 100 2e-16 seq6132 84.2 2e-11 >seq6679 Length=1512 Score = 100 bits (110), Expect = 2e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964 ||||||| |||||||| | || ||| || |||| || |||||| ||||| | Sbjct 429 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 370 Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024 |||||||| || || | ||||||||| ||| | ||| | ||| | |||||||||| Sbjct 369 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 310 Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084 ||| | || ||||||| ||| || || | || | || |||||||||||||| Sbjct 309 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 250 Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144 |||| | ||| |||| || || ||| || | |||||| || ||| Sbjct 249 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 190 Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194 ||| ||||| | ||||| ||||||| ||| || |||||||| || || Sbjct 189 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 140 >seq6132 Length=435 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/157 (74%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 94500 TTTCCATTCATAAAAACTGTCAGC-CGGTATGATACAACGTTTGCTTACGAGC-GGCTTT 94557 ||||||||||||||| | ||| || || |||||||| ||| || | ||| || Sbjct 90 TTTCCATTCATAAAATC-CCGAGCATGGGATAATACAACGCTTGGAACTGATCAGGCGTT 148 Query 94558 CGAAAGCTGGGTTTCTCGGACAATGTTTCAGCACGGGCATTAATCATTTTATAGCCGATC 94617 || ||| |||||||| | | |||||| |||||||| |||||||| |||| ||| || Sbjct 149 TAAAGGCT-GGTTTCTCTGTGAGTGTTTCTGCACGGGCGTTAATCATCTTATTGCCTATT 207 Query 94618 TTTTCGTCTTTAGCCCATGGAGGGATAAGACCCCATC 94654 ||||| || || ||||| ||| | |||||||||| Sbjct 208 TTTTCATCCTTGGCCCAATTAGGAACTAGACCCCATC 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429966093753227