Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq2680 116 4e-22 seq1493 98.7 1e-16 seq6400 80.6 3e-11 >seq2680 Length=4113 Score = 116 bits (128), Expect = 4e-22 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14529 GGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGGC 14588 || ||||| |||||||||||||| ||||||||||||||||||||| | |||||||| Sbjct 2656 GGTACAGTGAAATGGTTTAACGCGGATAAAGGATTTGGCTTTATCGAAACTGAAGAAGGA 2715 Query 14589 AAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAA 14648 | ||| | |||| ||| ||| ||||| ||| || || | |||||| | |||||| Sbjct 2716 ACAGACGTATTCGTTCATTTCAGTGCAATTCAAGGCGACGGCTACAAATCTTTGGATGAA 2775 Query 14649 GGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAGTCAATATC 14708 || ||| || ||||||| || ||||| | ||||| | ||||| | || | Sbjct 2776 GGACAACGTGTCCAATTTGAAGTAACTCAAGGTAACCGTGGACCACAAGCTGAGAACGTT 2835 Query 14709 ACAAAAGCATAATTATATT 14727 || |||| |||||||||| Sbjct 2836 ACTAAAGTTTAATTATATT 2854 >seq1493 Length=1176 Score = 98.7 bits (108), Expect = 1e-16 Identities = 129/177 (73%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 14526 AATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTA--TCACTTCAGAAG 14583 || || ||||| ||||||||||||||||| ||||| | |||||||| ||| || |||| Sbjct 570 AAAGGTACAGTTAAATGGTTTAACGCAGAAAAAGGCTATGGCTTTATTTCAGTT--GAAG 627 Query 14584 AAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTG 14643 ||| | || | |||| || ||||| ||||||||| || || || ||| || | | Sbjct 628 GCGGCGAGGACGTATTCGTACATTTCTCCGCAATCCAAGGCGACGGCTTTAAAACATTGG 687 Query 14644 ATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAG 14700 | ||||||||| || ||||| || | || || | ||||||| |||||||| Sbjct 688 AAGAAGGTCAAGCGGTAGAATTCGAAATCACTGATGGAAACCGTGGTCCTCAAGCAG 744 >seq6400 Length=3413 Score = 80.6 bits (88), Expect = 3e-11 Identities = 118/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGGCAAAGA 14593 |||||||||||| |||||||| ||||| | || || || | ||||| ||| || Sbjct 829 AGTAAAATGGTTCAACGCAGAAAAAGGTTACGGTTTCATTGAAACTGAAGACGGCGGCGA 770 Query 14594 TTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGGTCA 14653 | |||| || ||||| ||||| ||||| || ||||||||| | | || |||||||| Sbjct 769 CGTATTCGTACATTTCTCCGCAATTCAATCCGAAGGATTCAAAACTTTGGAAGAAGGTCA 710 Query 14654 AAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAG 14700 | || ||||| || | | ||||| ||||| | ||||||| Sbjct 709 ATCCGTAGAATTCGACATCGTCGAAGGCGCGCGTGGACCGCAAGCAG 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48450091086486