Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq379 87.8 4e-12
>seq379
Length=54504
Score = 87.8 bits (96), Expect = 4e-12
Identities = 237/350 (68%), Gaps = 12/350 (3%)
Strand=Plus/Plus
Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892
||||| || |||||| ||| || || |||| ||||||||||||| | | || ||
Sbjct 4416 TTCAAGACTCTGGAGCGATCATACCTTCTCAGAATTGATGGCAAGGTTGCCGAGAGACCG 4475
Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC-GTGCT 248951
|| || ||| | ||||| ||||||||||| |||||| ||| ||||| || ||| | | |
Sbjct 4476 CAACAGATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGA-AGCAGCGAT 4534
Query 248952 CGAGACGTACACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010
|||||| |||| | ||| || | | | | |||||||| | || || || ||||
Sbjct 4535 CGAGACATACAACTACATGTCGTTGAAG-TACTTCACACATGCTTCGCCAACACTTTTCA 4593
Query 249011 ACGCCGGTACCGTCAACA--ATCAGCTGAGC-TCGTGCTTTCTTCTTGCCATGCAAGACG 249067
|| |||||| | ||| ||||| ||| || ||||| | | |||||| | || |
Sbjct 4594 GTGCTGGTACC--CCACAGGCGCAGCT-AGCATCCTGCTTCTTGGTGGCCATGAAGGATG 4650
Query 249068 ACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCG 249126
|| | || || || || ||||| | | || | | | || | ||| || || |||
Sbjct 4651 ACAGCATTGATGGTATCTACGACAC-CCTCAAGATATGTGCCATGATCTCCAAGAACGCT 4709
Query 249127 GGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176
||||| || ||||| || ||||||| | || | || || |||||
Sbjct 4710 GGCGGTATTGGTCTTCATGTTCACAACATCAGGGCTACAGGCTCATACAT 4759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073660590052288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |