Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq379 448 4e-121 seq6817 176 4e-39 seq260 111 1e-19 seq2864 86.0 6e-12 >seq379 Length=54504 Score = 448 bits (496), Expect = 4e-121 Identities = 1039/1548 (67%), Gaps = 42/1548 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | ||| || || || |||||||||| |||| | | Sbjct 5892 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 5833 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || || |||| ||||| | |||||| || || ||||||||||| | Sbjct 5832 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 5773 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || | |||||| | |||||||| Sbjct 5772 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 5713 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 | || |||| || ||| ||| ||||||| ||||| || | | |||| |||| | Sbjct 5712 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 5657 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||| ||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 5656 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 5598 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 | || | | ||| || ||||| || || | |||| | || ||| ||||| Sbjct 5597 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGA 5538 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | ||||| || | || ||| || || || | ||| | || || | || Sbjct 5537 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 5482 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923 | || ||||||| | || | |||| |||||| || | || || | || Sbjct 5481 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACCGGGTAGTAGTTGAT 5424 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 ||||| || |||||| ||| | || || | ||| || | | || Sbjct 5423 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 5364 Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 ||| |||| | |||| || | || | || | || | ||| || |||||| Sbjct 5363 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 5306 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| || | | |||||| | || || || || | ||| | | Sbjct 5305 CAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 5246 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| | ||| |||||||||| || || ||| | |||||||| || ||| Sbjct 5245 TTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 5186 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || ||||| |||||| ||||| ||||| || || ||| || ||||||| || Sbjct 5185 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 5126 Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| | Sbjct 5125 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 5067 Query 23278 ACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336 |||||| ||| || | ||| || || ||| | || ||||| ||| |||| | || Sbjct 5066 ACCGTAGACA-TCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGT 5008 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 | ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| | Sbjct 5007 TCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCG 4948 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | || || || || || || |||||| | |||| || | || ||||| || | Sbjct 4947 CACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGT 4888 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || |||| Sbjct 4887 GCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGT 4828 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 |||| || ||||||||||| |||| |||||| || || ||||||||||| | |||| | Sbjct 4827 AACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTG 4768 Query 23577 CGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635 | |||||| | || ||| | || | | ||||||||| || | ||| || || || Sbjct 4767 TG-CCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGAAGACCAATACCGCCA 4709 Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695 | || || ||||| || ||| || || ||||||||||| || || |||||||| Sbjct 4708 GCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCA 4649 Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755 || || | || |||||||| || || | | ||||| | || ||| | || ||| Sbjct 4648 TCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAA 4589 Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGG 23813 ||||| || || || || ||||| | || |||||| ||| ||||| || ||||| | Sbjct 4588 AGTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCGATCG 4531 Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 | || |||||||| || ||||| || |||| || || ||||| ||||| | ||| |||| Sbjct 4530 CTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTC 4471 Query 23874 TCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930 ||||| ||| | ||| | |||| ||| || ||||| || | || || || || | Sbjct 4470 TCTCGGCAACCTT---GCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGC 4414 Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 | || || | ||||| ||||| || || | || |||||||| |||| Sbjct 4413 CGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 4366 >seq6817 Length=715036 Score = 176 bits (194), Expect = 4e-39 Identities = 559/858 (65%), Gaps = 23/858 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | || || | || ||| Sbjct 197071 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 197012 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || || || || || | Sbjct 197011 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 196952 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| | Sbjct 196951 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 196892 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| | ||||||| ||||||| ||||| || || | || Sbjct 196891 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 196832 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | ||||| || ||||||||||| ||| | | || ||| | Sbjct 196831 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 196772 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | | ||| || |||||||| || ||||| | || || ||| || |||||| | Sbjct 196771 CAGCG-AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 196714 Query 57925 AGTGGTCAATCAAATGGA----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 | ||| | | ||||| | | ||| | | || |||||| | || ||| Sbjct 196713 ACTGGGCGTTGCGATGGATTTCTGACAAG----AACTCGACATTCGCCCTCCGTCTCATC 196658 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || || || ||||| || || ||||| || || || ||| || Sbjct 196657 GCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 196598 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 |||||||| || || ||| |||| || || || |||||| | || || || || ||| Sbjct 196597 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 196538 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || | || || || || || ||||| ||| ||| || | || || |||| | | Sbjct 196537 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 196478 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 | | | | ||| || |||||||| ||| |||| || | ||||| | || || Sbjct 196477 GCCCTTGTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGAC 196418 Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || | || | || || |||||| || | |||||| | |||||||| | Sbjct 196417 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 196360 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || ||||| | || || | | ||| | ||| || |||||| | | || Sbjct 196359 TCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 196302 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396 || || || || ||| | || ||||| | |||||||| ||||| ||||| || Sbjct 196301 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 196242 Query 58397 aGTTAGCGAATATCAAAA 58414 ||| |||| || || || Sbjct 196241 TGTTGGCGAGTACCAGAA 196224 >seq260 Length=339642 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | ||| Sbjct 135612 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAATCATCC 135553 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| ||| | || || ||||| Sbjct 135552 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 135494 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 135493 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 135434 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || ||||| || |||| || Sbjct 135433 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 135401 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || |||||| |||| || || | | Sbjct 135840 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 135781 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 135780 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 135721 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || | ||| || ||| || ||| Sbjct 135720 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 135661 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||||||||| || |||| ||| | || | || |||| Sbjct 135660 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 135612 >seq2864 Length=266724 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||||||||| || || ||||| || ||||| |||| || || || ||||| || Sbjct 248146 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 248087 Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | ||||| ||| || | | ||||||||| || | || || |||||||||||| Sbjct 248086 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 248030 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | || |||||||| || |||||||| || Sbjct 248029 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 248001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445723545132720