Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq379 448 4e-121
seq6817 176 4e-39
seq260 111 1e-19
seq2864 86.0 6e-12
>seq379
Length=54504
Score = 448 bits (496), Expect = 4e-121
Identities = 1039/1548 (67%), Gaps = 42/1548 (3%)
Strand=Plus/Minus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || || || |||||||| | ||| || || || |||||||||| |||| | |
Sbjct 5892 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 5833
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571
| ||||| | || || |||| ||||| | |||||| || || ||||||||||| |
Sbjct 5832 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 5773
Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631
|| |||||||| | || ||||||| | || || | |||||| | ||||||||
Sbjct 5772 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 5713
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689
| || |||| || ||| ||| ||||||| ||||| || | | |||| |||| |
Sbjct 5712 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 5657
Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749
|| |||| ||| || ||||| ||||| || | ||||| ||||| |||||
Sbjct 5656 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 5598
Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805
| || | | ||| || ||||| || || | |||| | || ||| |||||
Sbjct 5597 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGA 5538
Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865
||| | ||||| || | || ||| || || || | ||| | || || | ||
Sbjct 5537 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 5482
Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923
| || ||||||| | || | |||| |||||| || | || || | ||
Sbjct 5481 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACCGGGTAGTAGTTGAT 5424
Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983
||||| || |||||| ||| | || || | ||| || | | ||
Sbjct 5423 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 5364
Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038
||| |||| | |||| || | || | || | || | ||| || ||||||
Sbjct 5363 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 5306
Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098
|| || || ||||| || | | |||||| | || || || || | ||| | |
Sbjct 5305 CAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 5246
Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158
|| || ||||| | ||| |||||||||| || || ||| | |||||||| || |||
Sbjct 5245 TTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 5186
Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218
| || ||||| |||||| ||||| ||||| || || ||| || ||||||| ||
Sbjct 5185 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 5126
Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277
|| |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| |
Sbjct 5125 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 5067
Query 23278 ACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336
|||||| ||| || | ||| || || ||| | || ||||| ||| |||| | ||
Sbjct 5066 ACCGTAGACA-TCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGT 5008
Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396
| ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| |
Sbjct 5007 TCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCG 4948
Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456
| || || || || || || |||||| | |||| || | || ||||| || |
Sbjct 4947 CACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGT 4888
Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516
|||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||
Sbjct 4887 GCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGT 4828
Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576
|||| || ||||||||||| |||| |||||| || || ||||||||||| | |||| |
Sbjct 4827 AACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTG 4768
Query 23577 CGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635
| |||||| | || ||| | || | | ||||||||| || | ||| || || ||
Sbjct 4767 TG-CCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGAAGACCAATACCGCCA 4709
Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695
| || || ||||| || ||| || || ||||||||||| || || ||||||||
Sbjct 4708 GCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCA 4649
Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755
|| || | || |||||||| || || | | ||||| | || ||| | || |||
Sbjct 4648 TCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAA 4589
Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGG 23813
||||| || || || || ||||| | || |||||| ||| ||||| || ||||| |
Sbjct 4588 AGTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCGATCG 4531
Query 23814 CGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
| || |||||||| || ||||| || |||| || || ||||| ||||| | ||| ||||
Sbjct 4530 CTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTC 4471
Query 23874 TCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930
||||| ||| | ||| | |||| ||| || ||||| || | || || || || |
Sbjct 4470 TCTCGGCAACCTT---GCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGC 4414
Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
| || || | ||||| ||||| || || | || |||||||| ||||
Sbjct 4413 CGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 4366
>seq6817
Length=715036
Score = 176 bits (194), Expect = 4e-39
Identities = 559/858 (65%), Gaps = 23/858 (3%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||||||||| || || || || ||||| | || || | || |||
Sbjct 197071 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 197012
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | |||| || || || || || |
Sbjct 197011 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 196952
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| |
Sbjct 196951 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 196892
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || ||||| | ||||||| ||||||| ||||| || || | ||
Sbjct 196891 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 196832
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864
|| ||| | || || || | ||||| || ||||||||||| ||| | | || ||| |
Sbjct 196831 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 196772
Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924
| | ||| || |||||||| || ||||| | || || ||| || |||||| |
Sbjct 196771 CAGCG-AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 196714
Query 57925 AGTGGTCAATCAAATGGA----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
| ||| | | ||||| | | ||| | | || |||||| | || |||
Sbjct 196713 ACTGGGCGTTGCGATGGATTTCTGACAAG----AACTCGACATTCGCCCTCCGTCTCATC 196658
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || |||||||| || || || ||||| || || ||||| || || || ||| ||
Sbjct 196657 GCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 196598
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
|||||||| || || ||| |||| || || || |||||| | || || || || |||
Sbjct 196597 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 196538
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160
|| | || || || || || ||||| ||| ||| || | || || |||| | |
Sbjct 196537 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 196478
Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220
| | | | ||| || |||||||| ||| |||| || | ||||| | || ||
Sbjct 196477 GCCCTTGTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACAGAC 196418
Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278
|| || || | || | || || |||||| || | |||||| | |||||||| |
Sbjct 196417 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 196360
Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336
| || ||||| | || || | | ||| | ||| || |||||| | | ||
Sbjct 196359 TCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 196302
Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396
|| || || || ||| | || ||||| | |||||||| ||||| ||||| ||
Sbjct 196301 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 196242
Query 58397 aGTTAGCGAATATCAAAA 58414
||| |||| || || ||
Sbjct 196241 TGTTGGCGAGTACCAGAA 196224
>seq260
Length=339642
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | |||
Sbjct 135612 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAATCATCC 135553
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || || || |||||||| ||| | || || |||||
Sbjct 135552 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 135494
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| ||
Sbjct 135493 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 135434
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || ||||| || |||| ||
Sbjct 135433 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 135401
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| || |||||| |||| || || | |
Sbjct 135840 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 135781
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| || | || || ||||||
Sbjct 135780 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 135721
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| | || || | ||| || ||| || |||
Sbjct 135720 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 135661
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||||||||| || |||| ||| | || | || ||||
Sbjct 135660 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 135612
>seq2864
Length=266724
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 6/149 (4%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||||||||| || || ||||| || ||||| |||| || || || ||||| ||
Sbjct 248146 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 248087
Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318
|| | ||||| ||| || | | ||||||||| || | || || ||||||||||||
Sbjct 248086 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 248030
Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347
| || |||||||| || |||||||| ||
Sbjct 248029 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 248001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445723545132720
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