Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07-
28] 7,691 sequences; 41,753,485 total letters
Query= NC_003157.5
Length=43106
Score E
Sequences producing significant alignments: (Bits) Value
seq1760 111 4e-20
>seq1760
Length=424
Score = 111 bits (122), Expect = 4e-20
Identities = 210/309 (68%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 917 TACTGGGATTCTTTTGATGCAGGAATTTACGTAGACGTTGTGACAGGAGAACCACTTTTC 976
||||||||| | | |||| | ||||| || || || || || ||||| || |||||
Sbjct 116 TACTGGGATACGTATGATCCGGGAATCTATGTGGATGTGAGCACCGGAGAGCCTCTTTTT 175
Query 977 TCTTCAAAAGACAAATTTGAATCAGGTTGTGGTTGGCCAAGCTTTAGCCGCCCCATCAGC 1036
| | || |||| ||| || |||||||| ||||||||||||| ||| || |||
Sbjct 176 GCCAGTGAGGATAAATATGATTCCGGTTGTGGCTGGCCAAGCTTTACCCGTCCAATCTTA 235
Query 1037 CCAGACGTTGTCCGCTACAAGGAAGATAAGAGTTTCAATATGACGAGAACAGAAGTGCGC 1096
|||| ||||| ||| ||||||| | |||||| | |||||||| ||
Sbjct 236 GCAGATGTTGTGACCTATCGAGAAGATACTTCCTATCATATGATCCGGACAGAAGTCCGG 295
Query 1097 AGCCGTTCAGGGAATTCTCATCTGGGGCATGTCTTTACTGACGGACCTAAAGACCAAGGC 1156
|| || |||||| || ||| || || ||||| ||| || || || ||| || ||
Sbjct 296 AGTCGCTCAGGGGATATTCACCTTGGTCATGTTTTTGACGATGGGCCCGCAGATCACGGA 355
Query 1157 GGCCTTCGTTACTGCATCAATAGCTTGTCTATTACCTTTATTCCAAAAGCTGATATGGAA 1216
||| ||||||||||| || ||| || ||| ||| ||||| || || ||| ||
Sbjct 356 GGCAAGCGTTACTGCATTAACAGCGCTTCGATTCACTTCATTCCTTTGGCGGAGATGCAA 415
Query 1217 GCTAAGGGC 1225
|| || |||
Sbjct 416 GCAAAAGGC 424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137805013032456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |