Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236925.1_202017-07- 28] 7,691 sequences; 41,753,485 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq1760 111 4e-20 >seq1760 Length=424 Score = 111 bits (122), Expect = 4e-20 Identities = 210/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 917 TACTGGGATTCTTTTGATGCAGGAATTTACGTAGACGTTGTGACAGGAGAACCACTTTTC 976 ||||||||| | | |||| | ||||| || || || || || ||||| || ||||| Sbjct 116 TACTGGGATACGTATGATCCGGGAATCTATGTGGATGTGAGCACCGGAGAGCCTCTTTTT 175 Query 977 TCTTCAAAAGACAAATTTGAATCAGGTTGTGGTTGGCCAAGCTTTAGCCGCCCCATCAGC 1036 | | || |||| ||| || |||||||| ||||||||||||| ||| || ||| Sbjct 176 GCCAGTGAGGATAAATATGATTCCGGTTGTGGCTGGCCAAGCTTTACCCGTCCAATCTTA 235 Query 1037 CCAGACGTTGTCCGCTACAAGGAAGATAAGAGTTTCAATATGACGAGAACAGAAGTGCGC 1096 |||| ||||| ||| ||||||| | |||||| | |||||||| || Sbjct 236 GCAGATGTTGTGACCTATCGAGAAGATACTTCCTATCATATGATCCGGACAGAAGTCCGG 295 Query 1097 AGCCGTTCAGGGAATTCTCATCTGGGGCATGTCTTTACTGACGGACCTAAAGACCAAGGC 1156 || || |||||| || ||| || || ||||| ||| || || || ||| || || Sbjct 296 AGTCGCTCAGGGGATATTCACCTTGGTCATGTTTTTGACGATGGGCCCGCAGATCACGGA 355 Query 1157 GGCCTTCGTTACTGCATCAATAGCTTGTCTATTACCTTTATTCCAAAAGCTGATATGGAA 1216 ||| ||||||||||| || ||| || ||| ||| ||||| || || ||| || Sbjct 356 GGCAAGCGTTACTGCATTAACAGCGCTTCGATTCACTTCATTCCTTTGGCGGAGATGCAA 415 Query 1217 GCTAAGGGC 1225 || || ||| Sbjct 416 GCAAAAGGC 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137805013032456